KEGG   Pseudomonas canavaninivorans: LOY40_28610
Entry
LOY40_28610       CDS       T08625                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pcas  Pseudomonas canavaninivorans
Pathway
pcas02025  Biofilm formation - Pseudomonas aeruginosa
pcas03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LOY40_28610
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LOY40_28610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcas02044]
    LOY40_28610
Secretion system [BR:pcas02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LOY40_28610
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: UVM72477
LinkDB
Position
6319642..6320130
AA seq 162 aa
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGSGGGAGKVNIQDLSLTK
YVDKASPNLMMHCASGKHVDKVKLTVRKAGGESQVEYMIINLEEVLITSLSTGGSGSDDR
LTENITLNFAKVLVDYQPQKADGTKEGGPVKFGWNIRQNVKV
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatattttcatcaagattggcgacatcaagggcgagtccatggacaaggcc
cacaaggacgagatcgacgtcctgaactggagctggggcatgtcccagtccggcaacatg
cacgtgggcagtggcggtggcgcgggcaaggtcaacatccaggacctgtcgctgaccaag
tacgtcgacaaggcttcgccgaacctgatgatgcactgcgccagcggcaagcacgtcgac
aaggtcaagctgaccgtgcgcaaggccggtggtgaaagccaggtcgagtacatgatcatc
aacctggaagaagtgctgatcacgtccctgagcaccggtggctcgggcagcgatgatcgc
ctgactgaaaacatcaccctgaacttcgccaaggtgctggtcgattaccagccacagaaa
gccgacggcaccaaggaaggcggcccggtcaagttcggctggaacatccgtcagaacgtc
aaggtgtaa

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