Pseudomonas alvandae B21-020: LOY40_28640
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Entry
LOY40_28640 CDS
T08625
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
pcas03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOY40_28640 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_28640 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_28640 (tssH)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_28640 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
AAA_25
Zeta_toxin
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
NACHT
AAA_14
Torsin
AAA_18
Hpr_kinase_C
CbiA
Clp_N
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
UVM72483
LinkDB
All DBs
Position
6324466..6327156
Genome browser
AA seq
896 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPENALTASDGFNAGSVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGTRQTHSESL
LSAERERLAELESRWAEEKTLVDELLETRATLRERVGVVDSEDSSDACDNESHELREKLV
DLQQRLTALQGENPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII
GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT
INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF
QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLE
IFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRC
TETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELKYDFSDAA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaagcc
atcgaagccgccaccgtattctgcaagttgcgcggtaacccttacgtggaactggcccac
tggtttcatcagttgctgcaattgcaggactcggacctgcaccgcatcatccgccagttc
aacatcgagccggcgcgcctggcccgtgacctgaccgaggccctggaccgtttgccacgg
ggttcgacgtcgatcaccgacctgtcctcccatgtcgaagaagccgtggaacgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgctcggc
atcctcaagacgccgagcctgcgccatgcgctgctgggcctgtcgtcggagtttgacaag
gtcaaggtcgaagccctgagcgaacgctttgacgaatacgtcggcgactcgccggaaaac
gccttgaccgccagcgacggtttcaacgcgggcagcgtgccgggcgaagccagcggcgcc
atggcccccagtgcgatgggcaaacaggaagccctcaagcgctttaccgtcgacctcacc
gagcaggcccgcagcggcaagctcgaccccatagttggccgtgacgaagagatccgccaa
ctggtggacattctcatgcgccgccggcagaacaacccgatcctcaccggtgaggccggc
gtgggcaagaccgccgtggtcgaaggcttcgccctgcgcatcgtcgccggcgacgtgccg
ccgtccctcaaggacgtggaactgcgcagcctcgatgtaggcctgttgcaggccggcgcg
agcatgaaaggtgaattcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
ccgaagccgatcatcctgttcatcgacgaagcccacaccctggtgggtgccggtggcgcc
gccggcacgggcgacgcggccaacctgctcaagccggcgctggcccgcggcaccttgcgt
accgtggccgccacgacctgggccgagtacaagaagcacatcgaaaaagacccggccctg
acccgtcgtttccaagtggtgcaagtggccgagccgtcggaagacaaagccctgctgatg
atgcgcggcgtggcctcgaccatggaaaaacaccatcaggtgcagatcctcgacgaagcc
ctggaagcctcggtcaagctgtcccaccgctacattcccgcacgccagctgccggacaaa
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtgccg
gccgaagtggacgacagccgccggcgcatcgaagcactggaaaccgagctgcagatcatc
gcccgcgaacacgcgattggcgtggtcatcggcactcgccagacccacagcgaaagcctg
ctgagcgctgagcgcgaacgcctggccgaactggaaagccgctgggccgaagagaaaacc
ctggtggacgaattgctggaaacccgcgccaccctgcgcgaacgcgttggcgtggtggac
agcgaagacagcagcgacgcttgcgacaacgaaagtcacgaactgcgcgagaaactggtg
gacctgcaacagcgcctgaccgccctgcaaggagagaacccgcttatcctgccaaccgtt
gattaccaggccgtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatg
gcccgcaacgaactggaaaccgtgctcaacctcgaccagcacctgaagaaacgcatcatc
ggccaggaccatgccttgcagatgatcgccaagcgcatccagacctcccgcgccggcctc
gataacccgagcaagccgattggcgtgttcatgctcgccggcacctccggcgtgggcaag
accgaaaccgccctggccctggccgaagccatgtacggcggcgagcagaacgtcatcacc
atcaacatgagcgagttccaggaagcccacaccgtgtccaccctcaagggcgcgccaccg
ggctacatcggctacggcgaaggcggcgtgctgaccgaagccgtgcggcgcaaaccgtac
agcgtggtgctgctggacgaggtggaaaaagcccacccggacgtgcacgaaatcttcttc
caggtgttcgacaaaggcgtgatggaggacggcgaaggccgggtgatcgacttcaagaac
accttgatcctgctgaccaccaacgccggcaccgagctgatcgcccaggtttgcaaggac
ccgcagaacgtcccagaaccggaagaaatcgccaaggccctgcgccagccgctgctggaa
attttcccgccggccctgctcggccgtctggtgacgatcccgtattacccgctcagcgac
gagatgctcaaggccatcacccgcctgcaactcaaccgcatcaagaagcgcgtggagagc
acccacaaggtcgccttcgactacgacgacgcggtgatcgatctgatcgtctcgcgttgc
accgaaaccgaaagcggcgggcgcatgatcgacaccatcctgaccaacagcctgctgccg
gacatgagccgcgagttcctgactcgcatgctcgaaggcaaggccctggccggtgtgcgg
atcagtgccgtggacaacgaactgaagtacgatttcagcgacgcggcctga
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