Pseudomonas alvandae B21-020: LOY40_29055
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Entry
LOY40_29055 CDS
T08625
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00010
Glycolysis / Gluconeogenesis
pcas00020
Citrate cycle (TCA cycle)
pcas00260
Glycine, serine and threonine metabolism
pcas00280
Valine, leucine and isoleucine degradation
pcas00310
Lysine degradation
pcas00380
Tryptophan metabolism
pcas00620
Pyruvate metabolism
pcas00630
Glyoxylate and dicarboxylate metabolism
pcas00640
Propanoate metabolism
pcas00670
One carbon pool by folate
pcas00785
Lipoic acid metabolism
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01120
Microbial metabolism in diverse environments
pcas01200
Carbon metabolism
pcas01210
2-Oxocarboxylic acid metabolism
pcas01240
Biosynthesis of cofactors
Module
pcas_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcas_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcas_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pcas_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pcas_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LOY40_29055 (lpdA)
00020 Citrate cycle (TCA cycle)
LOY40_29055 (lpdA)
00620 Pyruvate metabolism
LOY40_29055 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LOY40_29055 (lpdA)
00640 Propanoate metabolism
LOY40_29055 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOY40_29055 (lpdA)
00280 Valine, leucine and isoleucine degradation
LOY40_29055 (lpdA)
00310 Lysine degradation
LOY40_29055 (lpdA)
00380 Tryptophan metabolism
LOY40_29055 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LOY40_29055 (lpdA)
00670 One carbon pool by folate
LOY40_29055 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcas04147
]
LOY40_29055 (lpdA)
Enzymes [BR:
pcas01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LOY40_29055 (lpdA)
Exosome [BR:
pcas04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LOY40_29055 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
HI0933_like
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_3
GIDA
Lys_Orn_oxgnase
NAD_binding_8
Thi4
FAD_binding_2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UVM72560
LinkDB
All DBs
Position
6422632..6424032
Genome browser
AA seq
466 aa
AA seq
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MSNYDVIILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELY
EAAKGSEFAHLGINVSPTLDLAQMMKQKNESVAGLTKGIEFLFRKNKVDWIKGWGHIDGP
GKVTVTGEDGTQVELSAKDIIIATGSEPTPLPGVDIDNRRILDSTGALSLGEVPRHLVVI
GAGVIGLELGSVWRRLGAQVTVVEYLDRICPGADGETAKTLQRALAKQGIEFKLSTKVTR
AESSQKDVQLQVEPASGGEAQTLDADYVLVAIGRRPYTQGLGLENVRLETDKRGMLANQR
HRTEAPGVWVIGDVTSGPMLAHKAEDEAMACLEQIVGKAGEVNYDLIPSVIYTRPELASV
GRTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADEHTDEILGVHLVGPSVSE
MIGEYCVAMEFGASAEDIALICHPHPTRSEALRQAAMNVEGMATQI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacgacgtgatcattctgggcggtggacccggcggctataacgcagccatt
cgagccggacaacttgggttgaaagccgcctgcgtcgaaggccgcgccaccctgggcggc
acctgcctgaacgtcggctgcatgccctccaaggcgctgcttcacgcgtctgaactctac
gaagcggccaaaggctcggaattcgcccacctgggcatcaacgtcagccctaccctcgac
ctcgcgcagatgatgaagcagaagaacgaaagcgtcgcgggcctgaccaagggcatcgag
tttctgtttcgcaagaacaaggtcgactggatcaagggctggggccatatcgatgggccc
ggcaaagtgaccgtcaccggcgaagacggcacccaggttgaactgagcgccaaggacatc
atcatcgccaccggctcggaaccgacgccactgcccggcgtggacatcgataaccggcgc
atcctggactccaccggcgcgctgtccttgggcgaagtgccccggcatctggtggtgatt
ggcgcaggcgtcatcggccttgagctgggttcagtctggcgacgcctgggggcccaagtg
accgtggtggaataccttgatcgcatctgcccgggggcggatggcgagaccgccaagacc
ctgcaacgggccttggccaaacaggggatcgagttcaagttgagcaccaaggtcacccgc
gcggagtcttcccaaaaggatgtgcaattgcaggtcgaaccggcgtcaggcggcgaggca
cagaccctggatgccgactacgtgctggtcgccatcggtcgtcggccttacacccaaggg
ctgggcctggaaaacgtcaggctggagacggataaacgcggcatgctcgccaaccagcgc
caccgcaccgaagcccctggcgtttgggtcatcggggacgtgacttccgggccgatgctg
gcccacaaggccgaggatgaggccatggcctgcctcgaacagatcgtcggcaaggccggt
gaggtcaattacgacctgatccctagcgtcatctacacccgtccggaactggccagcgtc
ggcaggaccgaagagcagctcaaggccgaaggccgagcctacaaggtcgggaaattcccg
ttcacggccaacagccgggcgaagatcaaccatgagaccgaggggttcgccaaggtcctg
gccgatgaacacaccgacgaaattctcggtgtgcacctggtcggcccgagtgtcagcgaa
atgatcggcgagtactgcgtggccatggaattcggcgcctcggccgaagacatcgcgctg
atctgccatccccaccccactcgctcggaggcgttgcgccaggcggcgatgaacgtagag
gggatggcgacgcagatttag
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