KEGG   Pseudomonas alvandae B21-020: LOY40_29055
Entry
LOY40_29055       CDS       T08625                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pcas  Pseudomonas alvandae B21-020
Pathway
pcas00010  Glycolysis / Gluconeogenesis
pcas00020  Citrate cycle (TCA cycle)
pcas00260  Glycine, serine and threonine metabolism
pcas00280  Valine, leucine and isoleucine degradation
pcas00310  Lysine degradation
pcas00380  Tryptophan metabolism
pcas00620  Pyruvate metabolism
pcas00630  Glyoxylate and dicarboxylate metabolism
pcas00640  Propanoate metabolism
pcas00670  One carbon pool by folate
pcas00785  Lipoic acid metabolism
pcas01100  Metabolic pathways
pcas01110  Biosynthesis of secondary metabolites
pcas01120  Microbial metabolism in diverse environments
pcas01200  Carbon metabolism
pcas01210  2-Oxocarboxylic acid metabolism
pcas01240  Biosynthesis of cofactors
Module
pcas_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcas_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcas_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pcas_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pcas_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LOY40_29055 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LOY40_29055 (lpdA)
   00620 Pyruvate metabolism
    LOY40_29055 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LOY40_29055 (lpdA)
   00640 Propanoate metabolism
    LOY40_29055 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LOY40_29055 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LOY40_29055 (lpdA)
   00310 Lysine degradation
    LOY40_29055 (lpdA)
   00380 Tryptophan metabolism
    LOY40_29055 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LOY40_29055 (lpdA)
   00670 One carbon pool by folate
    LOY40_29055 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcas04147]
    LOY40_29055 (lpdA)
Enzymes [BR:pcas01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LOY40_29055 (lpdA)
Exosome [BR:pcas04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LOY40_29055 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like Pyr_redox_3 AlaDh_PNT_C FAD_binding_3 GIDA Lys_Orn_oxgnase NAD_binding_8 Thi4 FAD_binding_2 3HCDH_N
Other DBs
NCBI-ProteinID: UVM72560
LinkDB
Position
6422632..6424032
AA seq 466 aa
MSNYDVIILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELY
EAAKGSEFAHLGINVSPTLDLAQMMKQKNESVAGLTKGIEFLFRKNKVDWIKGWGHIDGP
GKVTVTGEDGTQVELSAKDIIIATGSEPTPLPGVDIDNRRILDSTGALSLGEVPRHLVVI
GAGVIGLELGSVWRRLGAQVTVVEYLDRICPGADGETAKTLQRALAKQGIEFKLSTKVTR
AESSQKDVQLQVEPASGGEAQTLDADYVLVAIGRRPYTQGLGLENVRLETDKRGMLANQR
HRTEAPGVWVIGDVTSGPMLAHKAEDEAMACLEQIVGKAGEVNYDLIPSVIYTRPELASV
GRTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADEHTDEILGVHLVGPSVSE
MIGEYCVAMEFGASAEDIALICHPHPTRSEALRQAAMNVEGMATQI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagcaattacgacgtgatcattctgggcggtggacccggcggctataacgcagccatt
cgagccggacaacttgggttgaaagccgcctgcgtcgaaggccgcgccaccctgggcggc
acctgcctgaacgtcggctgcatgccctccaaggcgctgcttcacgcgtctgaactctac
gaagcggccaaaggctcggaattcgcccacctgggcatcaacgtcagccctaccctcgac
ctcgcgcagatgatgaagcagaagaacgaaagcgtcgcgggcctgaccaagggcatcgag
tttctgtttcgcaagaacaaggtcgactggatcaagggctggggccatatcgatgggccc
ggcaaagtgaccgtcaccggcgaagacggcacccaggttgaactgagcgccaaggacatc
atcatcgccaccggctcggaaccgacgccactgcccggcgtggacatcgataaccggcgc
atcctggactccaccggcgcgctgtccttgggcgaagtgccccggcatctggtggtgatt
ggcgcaggcgtcatcggccttgagctgggttcagtctggcgacgcctgggggcccaagtg
accgtggtggaataccttgatcgcatctgcccgggggcggatggcgagaccgccaagacc
ctgcaacgggccttggccaaacaggggatcgagttcaagttgagcaccaaggtcacccgc
gcggagtcttcccaaaaggatgtgcaattgcaggtcgaaccggcgtcaggcggcgaggca
cagaccctggatgccgactacgtgctggtcgccatcggtcgtcggccttacacccaaggg
ctgggcctggaaaacgtcaggctggagacggataaacgcggcatgctcgccaaccagcgc
caccgcaccgaagcccctggcgtttgggtcatcggggacgtgacttccgggccgatgctg
gcccacaaggccgaggatgaggccatggcctgcctcgaacagatcgtcggcaaggccggt
gaggtcaattacgacctgatccctagcgtcatctacacccgtccggaactggccagcgtc
ggcaggaccgaagagcagctcaaggccgaaggccgagcctacaaggtcgggaaattcccg
ttcacggccaacagccgggcgaagatcaaccatgagaccgaggggttcgccaaggtcctg
gccgatgaacacaccgacgaaattctcggtgtgcacctggtcggcccgagtgtcagcgaa
atgatcggcgagtactgcgtggccatggaattcggcgcctcggccgaagacatcgcgctg
atctgccatccccaccccactcgctcggaggcgttgcgccaggcggcgatgaacgtagag
gggatggcgacgcagatttag

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