Parolsenella catena: Pcatena_00300
Help
Entry
Pcatena_00300 CDS
T05797
Symbol
trmA_1
Name
(GenBank) TrmA family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcat03009
]
Pcatena_00300 (trmA_1)
Enzymes [BR:
pcat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Pcatena_00300 (trmA_1)
Ribosome biogenesis [BR:
pcat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pcatena_00300 (trmA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
PCMT
Cons_hypoth95
UPF0020
TRM5-TYW2_MTfase
Methyltransf_15
TRM
Methyltransf_24
Methyltransf_11
CMAS
PrmA
Methyltransf_12
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
BBH49443
UniProt:
A0A3G9JVE8
LinkDB
All DBs
Position
complement(41404..42609)
Genome browser
AA seq
401 aa
AA seq
DB search
MGFKTYTCPIAKSCGGCEWLAVPYPIQLKRKRDAVLQLFADVLPSGATVQQREELVPIYG
MDTDGMEPTGYRHKAATPFAPGKRGSIRSGFYTRGTHRIVPCASCVVEAPHAREALLAVA
RAAEELRIPAYDEDHGRGLLRHAIVRMGYATDEALLTVVTNGGQIARERQFVERIRARAP
FVTAIAQNVNQRHTNAILGHETRALYGGGHMVDGLLDCEFEIGPTSFYQTNPAQTEVLYS
LAIEGARLERGMRVLDAYCGIGTIGMCAAKQVDGLAVVGVEQVEGAVANARANARRNGLA
DRCKFVCADATSYMRDVARAGREGFDAVIMDPPRAGSTPTFINGVLGLAPERVVYVSCNP
ATQRRDLQLFLDGGYDIESLEVVDMFPHTKHAETVLVLRRR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaagacgtacacctgcccgatcgccaagagttgcggcggatgcgagtggctg
gcagtgccctaccccatccagctcaagcgcaagcgcgatgccgtgctccagctgttcgca
gacgtgctgccctccggcgccacagtccagcagcgcgaggagctcgttcccatctacggc
atggacacggatggcatggagcccaccggctaccgccacaaggcggccacgccgttcgcg
ccgggcaagcgcggcagcatccgctcgggcttctatacgcggggaacgcacaggatcgtg
ccgtgcgcgagctgcgtcgtggaggcaccgcacgcgcgcgaggcgctcctcgccgttgcc
cgcgccgccgaggagctccgcatccccgcctatgacgaggaccacggccgtggccttttg
cgccacgccatcgtgcgcatggggtatgccaccgacgaggcgctgctcaccgtggtcacg
aacggcggtcagattgcgcgcgagcgacagttcgtcgagcgcatccgcgcccgcgcccca
ttcgtgacggccatcgcccagaacgtgaaccagcgccacacgaacgccattctcggccac
gagacccgtgctctgtacggcggcgggcacatggtggacgggctccttgactgcgagttc
gagattggccccacgtcgttctaccagacgaatcccgctcagaccgaggtgctctactcg
ctcgccatcgagggcgcaaggcttgagcgcggcatgcgcgtgctcgacgcctactgcggc
atcggcacgattggcatgtgcgcggccaagcaggtcgacggccttgcggtcgtgggcgtg
gagcaggtcgagggcgccgttgcgaacgcgcgcgccaacgctcgccgcaacgggttggcc
gatcgctgcaagttcgtctgcgcggatgcgacgtcctacatgagggacgttgcccgagcc
gggcgcgagggtttcgacgccgtcatcatggacccgccgcgcgcggggtccacgcccacg
ttcatcaatggcgtgctgggccttgccccggaacgcgtggtctacgtgagctgcaacccc
gccacgcagcgccgcgaccttcagctgttcctcgacggcggctacgacatcgagagtctc
gaggtcgtggacatgttcccgcacacaaagcacgccgagaccgtcctggttctgcgccgt
cgctag
DBGET
integrated database retrieval system
