Parolsenella catena: Pcatena_01810
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Entry
Pcatena_01810 CDS
T05797
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pcat
Parolsenella catena
Pathway
pcat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pcatena_01810 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcat03021
]
Pcatena_01810 (rpoC)
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_01810 (rpoC)
Enzymes [BR:
pcat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pcatena_01810 (rpoC)
Transcription machinery [BR:
pcat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pcatena_01810 (rpoC)
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pcatena_01810 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
CBP4
Motif
Other DBs
NCBI-ProteinID:
BBH49594
UniProt:
A0A3G9K6F5
LinkDB
All DBs
Position
214832..219268
Genome browser
AA seq
1478 aa
AA seq
DB search
MADFDTTDFDAIKISLASADDIRRWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPVKDW
ECACGKYKGIRFKNIVCERCGVEVTTAKVRRERMGHIELAAPVSHIWYFKSPSSFPLSRM
LDMKSKDLEKVLYFASYVITDVDTEAREADAADLKEELAADLEQLDAERDEQIERMRADQ
AAGIVDEFDGSEVLSDEELAAAIVDLREEYEEEKQLRTEAYEKFMTLEVRELISDESLFR
EIKRYYSIYFKGGMGAEAVRELLRAIDLEKTAAELRAIIADDKGQKQKREKAVKRLEIVD
AFLEGHNDPANMILDVVPVIPPDLRPMVQLDGGRFAASDLNDLYRRVVNRNNRLKRLLDL
DAPAIIVNNEKRMLQESVDALFDNGRRGRPVTGRGGRPLKSLAEALKGKQGRFRQNLLGK
RVDYSGRSVIVTDPHLKLHQCGLPKTMALELFKPFVMRRLVELGKVENIKGAKRAIDRSL
PAVWDVLDEVINDRLVLLNRAPTLHRLSIQAFEPVLVEGKAIHLHPLVCAPFNADFDGDQ
MSVHVPLSTKAQTEARVLMLSSNNLRSPASGKVLTVPSQDMVFGTYFLTTEKDGMPGEGH
VFASFDDAMAAYDSRINVDIQAKVIVRVSAADSNAEADGRKVFRVRTAWGKEEDIDVNDK
PARFETTIGRIIFNRQCLPADYPFINYKMVKSDMGKLVNDCCDRYPLAQVEPILDAIKYA
GFHFATRAGLTVSVWDAVIPGCKEKMIAEAQANVNEINEYYEDGFLSEQERHIEVVNAWT
ECTEALGKAMLEGFDDDNPIYMMADSGARGSKTQLRQLAGMRGLMADMSGDTIDLPIKAN
FREGLLPLEYFISTYGARKGLVDTASHTSDSGYLTRRLVDVAQDVIVREEDCGTTEGVTY
KLVKPGTTDINADLVGRCALNDVVNPETGEVLIPKDGYIESVADIQRLLDAGLKTVELRA
LLTCRSKNGVCQKCYGWDLSTRRPVNVGTAVGIIAAQSIGEPGTQLTMRTIHSGGVAGAD
DITQGLPTVGRMFDVVGNVNEKILGREADLAPLSGKLSIQPEQTEYLVRILDPEDNSRIL
DEKRIPASARFMPGIEDGCDVRAGDQITKGFVNFRNLRRLTDIESTMHTFVESVKDVYTS
QGVELNDKHIEVIARQMLRRVQITNPGDSKYLMGQYIDRYEFADTVNEITLAGGVAPEAE
PAILGTLKVASSIDSWLSSASFIRTAGVLTEAAISGEVDNLMDLKSNVIVGKKIPAGTGL
SAYSDVELTYHGQKISGPTEPTDKALPEWAPDELKAVEEKLPQQLDWVGDDYGFGGVYSK
NGRTLSSEDAKLYLFDDLGVSQRWTNKFGEVGIETVGDLIGKTEDDLLHIDGIGAKAIEE
LREGLEARNLLYILEPDDDAADEEDLSQLLNMVFSPDGGDDVMLGSASTTHHFDADDELI
GAPSKDAPKGDVINEGLDSLDALLSQVVSHDDAMGEDD
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatttcgataccactgacttcgacgccatcaagatctccctcgcctccgccgat
gacattcgcaggtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcacg
ctcaagcccgagaaggacggcctgttctgcgagaagatcttcggaccggtcaaggactgg
gagtgcgcctgcggcaagtacaagggcatccgcttcaagaacatcgtgtgcgagcgctgc
ggcgtcgaggtgacgaccgccaaggttcgtcgcgagcgcatgggccacatcgagctcgcc
gctcccgtgagccacatctggtacttcaagagcccctcgagcttcccgctgtcgcgcatg
ctcgacatgaagtccaaggacctcgagaaggtcctgtacttcgccagctacgtcatcacc
gacgtcgacaccgaggcccgcgaggccgacgccgccgacctcaaggaggagctggccgcc
gacctcgagcagctcgacgccgagcgcgacgagcagatcgagcgcatgcgtgccgaccag
gccgccggcatcgtcgacgagttcgacggctccgaggtcctctccgacgaggagctcgcc
gccgccatcgtcgacctgcgcgaggagtacgaggaggagaagcagctccgcaccgaggcc
tacgagaagttcatgacgctcgaggtccgcgagctcatctccgacgagagcctcttccgc
gagataaagcgctactactccatctacttcaagggtggcatgggcgccgaggccgtccgc
gagctgctccgcgccatcgacctggagaagacggctgccgagctgcgtgccatcatcgcc
gatgacaagggccagaagcagaagcgcgagaaggccgtcaagcgcctggagatcgtcgac
gcgttcctcgagggccacaacgaccccgcgaacatgatcctcgacgtcgtccccgtcatc
ccgcccgaccttcgcccgatggtccagctcgacggtggccgcttcgccgcgtccgacctc
aacgacctctaccgtcgcgtcgtcaaccgcaacaaccgactcaagcgcctgctcgacctt
gatgcccccgcgatcatcgtcaacaacgagaagcgcatgctgcaggagtccgtggacgcc
ctgttcgacaacggccgtcgcggccgtcccgtcaccggccgtggcggacgcccgctcaag
tcgctcgccgaggccctcaagggcaagcagggtcgcttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttccgtcatcgtcaccgatccgcacctcaagctccaccag
tgcggcctgcccaagacgatggccctcgagctgttcaagccgttcgtgatgcgtcgcctc
gtcgagcttggcaaggtcgagaacatcaagggcgccaagcgcgccatcgatcgcagcctg
ccggccgtgtgggacgtgctcgacgaggtcatcaatgaccgcctcgtcctgctcaaccgc
gcacctacgctgcaccgtctgtccatccaggccttcgagccggttctcgtcgagggcaag
gccatccacctgcacccgctcgtgtgcgcccccttcaacgccgacttcgacggcgaccag
atgtccgtgcacgtgccgctgtccacgaaggcccagaccgaggcccgcgtgctcatgctc
tcgtcgaacaacctgcgctcgccggcctccggcaaggtgctgaccgttccgtcccaggac
atggtcttcggcacgtacttcctcacgaccgagaaggacggcatgccgggcgagggccac
gtcttcgccagcttcgatgacgccatggccgcgtacgactcgcgcatcaacgttgacatc
caggccaaggtcatcgtgcgcgtgagcgccgccgactccaacgccgaggctgacggccgc
aaggtcttccgcgttcgcaccgcctggggcaaggaagaggacatcgacgtcaacgacaag
cccgcgcgcttcgagacgacgatcggccgcatcatcttcaaccgccagtgcctgcccgcc
gactaccccttcatcaactacaagatggtgaagagcgacatgggcaagctcgtcaacgac
tgctgcgaccgctacccgctcgcgcaggtcgagccgatcctggacgccatcaagtacgcc
ggcttccacttcgccacgcgtgccggcctgaccgtgtccgtctgggacgccgtcatcccc
ggctgcaaggagaagatgatcgccgaggcccaggccaacgtcaacgagatcaacgagtac
tacgaggacggcttcctgtccgagcaggagcgtcacatcgaggtcgtcaacgcctggacc
gagtgcaccgaggcgctgggcaaggcgatgctcgagggcttcgacgacgacaaccccatc
tacatgatggccgactccggcgcccgtggctccaagacgcagctgcgccagctcgcaggc
atgcgaggcctcatggccgacatgtccggcgacacgatcgaccttcccattaaggccaac
ttccgtgagggtctgctgccgctcgagtacttcatctccacgtacggcgctcgtaagggc
ctcgtcgacaccgcgtcgcacacgtccgactccggttacctcacgcgtcgtctcgtcgac
gtcgcgcaggacgtcatcgtgcgcgaggaggactgcggcaccaccgagggcgtcacgtac
aagctcgtgaagcccggtaccaccgatatcaacgccgacctcgtgggtcgctgcgccctc
aacgacgtcgtgaaccccgagacgggcgaggtgctcatccccaaggatggctacatcgag
tccgtggccgacatccagcgcctgcttgacgccggcctgaagacggttgagctccgcgcg
ctgctgacctgccgttccaagaacggcgtctgccagaagtgctacggctgggacctctcc
acgcgtcgtccggtcaacgtgggcaccgcggtgggcatcatcgccgcacagtccatcggc
gagcctggcacgcagctcacgatgcgcacgattcactccggcggcgtcgcaggcgccgac
gacatcacgcagggcctgcctacggtcggccgcatgttcgacgtcgttggcaacgtgaac
gagaagatccttggtcgcgaggccgacctggccccgctgtccggcaagctctccatccag
ccggagcagaccgagtacctcgtccgcatcctggaccccgaggacaactcgcgcatccta
gacgagaagcgcatccccgcgagcgcccgcttcatgccgggcatcgaggacggctgcgac
gttcgcgccggcgaccagatcacgaagggcttcgtgaacttccgcaacctgcgtcgcctc
acggacatcgagtcgacgatgcacacgttcgttgagagcgtcaaggacgtctacacgtcc
cagggcgtcgagctgaacgacaagcacatcgaggtcatcgcgcgccagatgctgcgtcgc
gtccagatcaccaaccccggtgactccaagtacctcatgggccagtacatcgaccgctac
gagttcgccgacacggtcaacgagatcacgctggccggcggcgtcgcacccgaggccgag
cctgccattctcggcacgctcaaggtcgcgagctccatcgactcctggctgtccagcgcg
tcgttcattcgcacggcgggcgtcctcaccgaggccgccatctccggcgaggtcgacaac
ctcatggacctcaagtccaacgtcatcgtgggcaagaagatcccggccggcactggcctg
tccgcctacagcgacgtcgagctcacctaccacggccagaagatctccggccccactgag
cccacggacaaggcgctgcccgagtgggcgcccgacgagctcaaggccgtcgaggagaag
ctcccgcagcagctcgactgggttggcgacgactacggctttggcggcgtgtactccaag
aacgggcgcacgctctccagcgaggacgccaagctctacctgttcgatgacctcggcgtg
tcccagcgctggacgaacaagttcggcgaggtgggcatcgagactgtgggcgacctcatc
ggcaagacggaggacgacctgcttcacatcgacggcattggcgcgaaggcgatcgaggag
ctgcgtgagggccttgaggctcgcaacctgctctacatcctcgagcccgatgacgacgcc
gctgacgaggaggacctgtcccagcttctgaacatggtgttctcgccggacggtggggat
gacgtcatgctcgggtccgcctctacgacgcatcacttcgatgccgacgacgagctcatc
ggcgctccgtccaaggacgcgcctaagggcgacgtcatcaacgagggtctcgactccctt
gacgcgctgctctcgcaggtcgtgagccacgacgacgccatgggcgaggacgattag
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