Parolsenella catena: Pcatena_05930
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Entry
Pcatena_05930 CDS
T05797
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_05930
Enzymes [BR:
pcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pcatena_05930
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pcatena_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
SelB-wing_1
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
BBH50006
UniProt:
A0A3G9K177
LinkDB
All DBs
Position
646486..649674
Genome browser
AA seq
1062 aa
AA seq
DB search
MGLTVIQTSDERRVGTCVERALREACGRARSVNPLVLAPSLSVSLEVQRALERIDGLSLG
VDCATPATWCELRWALYGDGRALVTPAARAVLMQRVVAQASADGTLEPLDAGAGTVQLLC
QAAQRGLPWLPAADAASLSVGEARALELLGRYARVLCQRRLVEPAEAAAALPGLMAEEGA
GLSPCVLVGFGELPRATRELALCYAAAGECTFVCQAGEGPAGDVARASAHKLEDEARSRG
IEVAHVGDAPAAPVERTAELSELLSCLFETGKEGMVPTGAVSLLEPAGPLAVASSVCAHV
CELADGGAQRVVIVAPDVAAAWRELSPKLHAHGITVRAQLGAPASQTRAGAGFLGLARSV
VALDALATTWPDDPGAELPDMSWWPPREVSDFLLLDVTGVGANRAWRRDVAWRGNRILTP
AEVLRTLQNHSATSPQVAGAVRELLRGHVAAAAMRLAASPQPDAAAADAVAAAEKPETGA
EERLSALLDAGAIGAVAEAGRTLRACGVSADEGATLEELVDLAGTALERLRVTCRPELAC
EGSPCTVELMSPKMAAALAPASADAVVYLGLDSASSPIPVPDSALDRLLEHCGVDVPADG
LASSRASFAAVAAAARRHLSLVRPSHDAGASETFPAVMLSEVLSCYAVGEDGRPLLKSDP
ASRVDEGHIGENLSASGTVPQAVEVAPAASAGQLDPALRRLVIVPRDGQPELPQGRPSLS
ASQVETYLECPYKWLTLRRLGLDDCDAEFSNMQVGTFVHRVLELTHRDLFLDAAREAGLV
GQDCGESPEGRLFWFDPAVRVAGSRVDERTLPRATRLMHAHFAEHLAHQRLEGSTRNKQA
LIAHTPSERRRLAEVERDIEATLEYEATRFAGFEPRLFEGRFGGSTGLPADYAGADFVGT
IDRIDVDEHGRALVIDYKHKSRLFEEYALSGRDEADWDAGFALPGRVQTLIYAGIARRLL
SDAGVELVGAVYLGTKGIHEIAGALTAHDAAAVLGSDVGEKRLERVCVPVPGARSFDELL
DRTEEAVAAVIERMLAGEVDARPSSPKACAWCPVLSCERRQS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaccgtcatacagacgagcgacgagcggcgcgtgggcacgtgcgtggagcgt
gcgctgcgcgaggcgtgcggacgcgctcgctcggtcaacccgctcgtgctcgcaccgagc
ctctcggtgtctctcgaggtgcagcgcgcgctcgagcgcatcgatggcctctccctgggc
gttgactgcgccacgccggctacgtggtgcgagcttcgctgggcgctttacggcgatggc
cgcgcgctcgtgacgccggcggcgcgcgccgtgctcatgcagcgcgtggttgcccaggcg
tccgccgacggcacccttgagccgctcgacgctggcgccggcacggtgcagctgctgtgc
caggcggcccagagggggctgccctggctgcctgccgcggatgccgcctcgctttctgtt
ggcgaggcccgcgccctcgagctgctcgggcgctatgcgcgcgtgctgtgccagcgccgg
cttgtggagcccgccgaggctgccgccgcgcttcccggcctcatggccgaggagggcgcg
gggctttccccgtgcgtgctcgtgggctttggcgagttgcctcgcgctactcgtgagctc
gctctttgctatgccgcggcgggggagtgcacgtttgtgtgccaggccggggaagggccc
gccggtgacgttgcccgcgcctcggcgcacaagctcgaggacgaggctcgctcgcggggc
atcgaggtcgcgcacgtgggcgacgcccccgccgcgcccgtcgagcgcaccgccgagctg
tcggagctgctctcgtgcctgttcgagacgggcaaggagggcatggtccccacgggcgca
gtgagcctgctcgagcccgcgggcccgctcgccgttgcctcgtccgtgtgcgcccacgtc
tgcgagcttgcggatgggggagcgcaacgcgtcgtcatcgtggccccggacgtggcggca
gcctggcgcgagctttcgcccaagctgcacgcccacggtatcacggtgcgcgcgcagctt
ggcgctcccgcctcccagacgcgtgccggtgcgggctttctcggcctcgcccggagcgtg
gttgcgctcgacgctctcgctacgacgtggcccgatgaccctggggccgagcttcccgac
atgagctggtggcccccgcgcgaggtctccgacttcctgctgctggacgtcacgggcgtg
ggcgccaaccgcgcctggcgccgcgacgtggcctggcgaggcaaccgcatcctcacgcct
gccgaggtgctgcgtacgctccagaaccactcggcaacgtctccgcaggtggccggtgcc
gtgcgcgagctcctgcgcgggcacgttgccgctgcggccatgcgccttgcggcgtcgcct
cagcctgatgccgctgccgcggacgccgtggccgcggccgagaagcccgagactggcgcc
gaggagcgcctgtccgcccttctcgacgcgggagccatcggcgccgtcgccgaggccggc
cgcacgctgcgtgcctgcggcgtctccgcggacgagggcgccacgctcgaggagctcgtc
gaccttgctggcacggcgctcgagcgtctgcgcgtcacgtgccgtcccgagcttgcgtgc
gagggttcgccgtgcaccgtggagctcatgagccccaagatggccgccgcgctcgcgccc
gcctcggccgatgccgtggtctacctggggctcgattccgcgagctctcccattcccgtg
ccagactctgcgcttgacaggcttctcgagcactgcggcgtcgatgtgcccgcggacggc
ctcgcgagctcgcgtgcctcgtttgccgcggtggccgcggcggcacggcggcacctgtcg
ctcgtgcgtcccagccatgacgcgggcgcgagcgagacgttccccgccgtcatgctctcc
gaggtcctctcgtgctacgccgtgggcgaggacggaaggccgctgctcaagtcagacccc
gcgtcacgcgtggacgaggggcacataggggagaacctctccgcgagtggcaccgtgccg
caggccgtcgaggtggcgcccgccgcttcggcggggcagctcgacccggcgctgcgcagg
ctcgtcatcgtcccgcgcgacggccagcccgagctgccgcagggccgcccgtcgctctcc
gcctcacaggtggagacctacctcgagtgcccctacaagtggctcacgctgcgccgcctg
ggcctggacgactgtgacgccgagttctcgaacatgcaggtgggaacctttgtccaccgc
gtgctcgagctcacgcaccgagacctgttcctggatgccgcgcgcgaggccggcctcgtg
gggcaggactgcggcgagtcgccggagggcaggctgttctggttcgaccctgccgtgcgc
gtggctgggtcgcgcgtggacgagcgaacgcttccgcgcgccaccaggctcatgcacgcc
cacttcgccgagcacctggcgcaccagcggctcgagggctccacgcgcaacaagcaggcg
ctcatcgcccacacgccctcggaacgccgccgcctcgccgaggtcgagcgtgacatcgag
gcgaccctcgagtacgaggcaacccgcttcgccggcttcgagccgcgtctgttcgagggg
cgcttcggcggctcgaccggccttccggcagactacgccggcgcggacttcgtgggcacg
atcgaccgcatcgacgtggacgagcacgggcgggcgctcgtcatcgactacaagcacaag
agccgcctgtttgaggagtacgcgttgagtggccgcgacgaggcggactgggatgctggc
tttgcgctgcccggacgcgtccagaccctcatctacgcgggcatcgcgcgccggctgctg
agtgacgcgggcgtggagcttgtgggtgccgtctacctgggcacgaagggcatccacgag
atcgctggcgccctcacggcgcacgacgccgcggcggtgctcgggtcagacgtgggcgag
aagcgcctcgagcgcgtctgcgtgccggtgccgggcgcgcgctcgttcgacgagctgctc
gaccgcacggaggaggccgtggcagccgtcatcgagcgcatgctcgccggcgaggtggac
gcgaggccctcctcgcccaaggcgtgcgcgtggtgtccggtgctgagctgcgagaggagg
cagtcatga
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