Parolsenella catena: Pcatena_05940
Help
Entry
Pcatena_05940 CDS
T05797
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_05940
Enzymes [BR:
pcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pcatena_05940
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pcatena_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
Tmemb_161AB
Motif
Other DBs
NCBI-ProteinID:
BBH50007
UniProt:
A0A3G9JWZ9
LinkDB
All DBs
Position
649671..653303
Genome browser
AA seq
1210 aa
AA seq
DB search
MSDIKLSTAEGREEGTAQVPPEVAALLKGLLPEQRRIVTTLDRPVFVAAGAGSGKTFTLT
RRIVWALCPGSGEGGRPFLDSLDQALVITFTEKAAGEIKERVRSALRQAGLGEEALKVDS
AWVSTIHHMCARILRAHALDLGLDPEFAMIGEQEARLLRSQATEQALREQQGSAGLDALY
AEFGTGTGSGRDGVPGLLATLISKAGSAERGLESLSFVEAGADVSGTMASLTLAYGALCA
CDLKHADELARVRGELARLEEFGQLPPSQRTPQAARELLGSIKGPDGRKWRAKNVKDLWA
ETKSSLEVARGEVDLACVMPLQEPLMALAGRVEQLYAAAKRSRGVLDNDDLLQLTARAFR
ERAGIADEYAHKFRLVMVDEFQDTNAQQVGMVKSLSGEGACHLTTVGDAQQAIYGFRGAD
VSVFEDRGEEVREAAKQGRAATVELAYNFRSDDAILRFVARACGSSGIVPRFMDLRPDPA
RKSDWPERRCPRVVVELTRAHRLGVRAVPKETRARLAAAQLADRLARIRDDVGVEPRRMA
VLMRSLTQAPVYIDALRERGLESVVVGGSTFAQASEVRVVEALLRCLACPQDTKSGLFGV
LESDMFELDGNDMLMLATRPQDVFDAPAKRRINVGVREGAPDFGNAAPSERLSHARRVIT
RAWDRVGKIPVADVLLMAIRESGWLLRLERGGVAGRAVAANVLAAVRHVRELSEPNQLDA
ILAADEFSRWLEAAKEGPASLSGEGLNAVSLMTAHASKGLEFDVVAVVGCCGSESSHKVG
RLLSLRDGARELLSLAPAGFKVPDLGEDAPADARDCDSALEWRALMEQTRTDAESREDGR
LLYVALTRARECVILCLSATEKKGGELSPVMTQQVAGALFGERPVAGEGSFGYGGRAEGL
VRCVDASLLPDGSVEVEAGGTLDASALTPAPAAGEGAKETSREPFLVFDIDAETRAPLGG
WRPRQDVFSYSSAHAALAAEAGASSLDDVLELPACLPVSEAQRARAGVVPAGEAPAAPSP
RRAETVLVDDDGEPADADDADRATCLGSAFHELARLMVETGHAPGERRVSVVAASYGVSR
RDRARLDAALARWERSDIRSEALSHACVRAEVPFFCGVSSPLGHDLEGAIDLLATDAPVA
REDASALLVDYKTGDHGLTLGQIRERHEMQARFYASVLRQQGWRHVTCAFVCVELSDELG
QPVVTRYEFG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatcaagctgagtacggcggaaggccgcgaggaagggacggcgcaggtgccg
cccgaggtcgccgccctgctcaaggggctgcttcccgagcagcgccgcatcgtgacgacg
cttgaccgcccggtgttcgtggcggcgggcgcgggctccggcaagacgttcacactcacg
cggcgcatcgtgtgggcgctgtgccccggctcgggcgagggcggcaggcccttcctcgac
agcctggaccaggcgctcgtcatcacgtttacggagaaggcagccggggagatcaaggag
cgcgtgcgctcggcgctgcgccaggcggggcttggcgaggaggcgctcaaggttgactcg
gcctgggtgagcacgatccaccacatgtgcgcccgcatcctgcgcgcgcacgccctggac
ctggggctcgaccccgagtttgccatgatcggcgagcaggaggcgcgcctcttgcgctcg
caggccaccgagcaggccctgcgcgagcagcagggctccgccggcctcgacgcgctctac
gccgagttcggcaccggcaccggctcgggccgcgacggcgtgcccggccttctcgccacg
ctcatctccaaggcgggctctgccgagcgcggcctcgagtcgctctcgttcgtcgaggcg
ggcgcggacgtctcgggcaccatggcatcgctgacgcttgcctacggggctctgtgcgcc
tgcgacctcaagcacgcagacgagctcgcgcgggtccgcggcgagctggcacggctcgag
gagttcgggcagctgccgcccagccagcgcacgccgcaggccgcacgcgagctgctcggc
tccatcaaggggcccgatggccgcaagtggcgcgccaagaacgtcaaggacctctgggca
gagacgaagtcctccctggaggtggcccgtggcgaggtggaccttgcctgcgtcatgccg
ctccaggagcccctcatggcgctcgccggccgcgtcgagcagctctacgcggccgcaaag
cgctcgcgcggcgtgctggacaacgacgacctgctccagctcacggcccgtgcctttcgc
gagcgcgcaggcattgcggacgagtacgcgcacaagttccgcctcgtcatggtcgacgag
ttccaggacacgaacgcccagcaggtgggcatggtcaagagcctgtcgggcgagggggcg
tgccacctcacgaccgtgggtgacgcccagcaggccatctacggcttccgcggggcagac
gtgagcgtgttcgaggaccgcggcgaggaggtccgcgaggccgccaagcagggacgtgcc
gccacggtggagctcgcctacaacttcaggagcgacgacgcgatccttcgcttcgtggcc
cgagcctgcggaagctccggcattgtgccgcgcttcatggacctgcgcccggacccggcc
cgcaagagcgactggcccgagaggcgctgcccgcgcgtcgtcgtggagctcacgcgcgcc
cacaggctgggggtgcgcgccgttcccaaggagacgcgcgcccggctcgctgccgcgcag
ctcgccgaccgcctcgcacgcatccgcgacgacgtcggcgtggagccgcgacgcatggcc
gtgctcatgcgcagcctcacgcaggcgcccgtctacatcgacgccctgcgcgagcgcggg
ctcgagagcgtcgtggtgggcggctccacgttcgcccaggcgagcgaggtccgcgtggtc
gaggcacttctgcgctgcctcgcctgtccgcaggacacaaagagcggcctgttcggcgtg
ctcgagagcgacatgttcgagcttgacggcaacgacatgctcatgctcgccacgcgcccg
caggacgtgttcgacgcccccgccaagcgccgcatcaacgtgggcgttcgcgagggtgcc
ccggactttggcaacgcggcgccctccgagcgcctctcccacgcccgtcgcgtgatcacg
cgcgcgtgggaccgcgtgggaaagattcccgtggcagacgttctgctcatggccatccgc
gagtccggctggcttttgcgcctcgagcgcgggggcgtcgcgggccgtgccgtggccgcc
aacgtgcttgccgccgtgcgtcacgtccgcgagctctccgagcccaaccagctcgacgcc
atcctcgccgcagacgagttctcgcgctggctcgaggcggccaaggagggcccggcgtcg
ctttccggcgagggcctcaacgccgtgagcctcatgacggcgcacgcctcgaagggcctc
gagttcgatgtcgtggccgtcgtggggtgctgcgggtccgagtcgtcccacaaggtgggg
cgcctgctgtctctgcgcgatggcgcccgcgagctgctttcgctggcaccggccggcttc
aaggtgcctgacctcggcgaggacgcgccggcagacgcccgcgactgcgacagcgcgctc
gagtggcgcgcgctcatggagcagacgaggacggacgccgagtctcgcgaggacggacgt
ttgctctacgtggcgctcacgcgcgcccgcgagtgcgtcatcttgtgcctctcggccacc
gagaagaagggcggcgagctgtcgcccgtcatgacgcagcaggtcgcgggcgcgctcttt
ggcgagcgcccggtcgccggcgagggctcgttcggctacggcgggcgcgccgagggcctc
gtgcgctgcgttgacgcatcgcttttgccagatggctccgtcgaggtcgaggctggcggc
acgctcgatgcctccgcacttacgcctgcgcccgccgccggcgaaggggcgaaggagacg
tcccgcgagcccttcctcgtctttgacatcgatgccgagacgcgcgcgccgctcgggggg
tggcgtccgcggcaggacgtgttcagctactcgagcgcccacgccgcgctcgcggcggag
gctggcgcctcgtctctcgacgacgtgctcgagctgcccgcgtgcctgcccgtctcggag
gcgcagagagcccgcgcgggcgtcgtgcccgccggcgaggcgcctgcggccccgagcccc
cgccgtgccgagaccgtgctcgtcgacgacgacggcgagccggccgatgccgacgacgct
gaccgcgccacctgcctgggcagcgcgttccacgagcttgcgcgtctcatggtcgagacg
gggcacgcgcccggtgagcggcgcgtctcggtcgtggccgcctcctacggcgtctcgcgc
cgggaccgcgcccgcctggacgccgcgctcgcgcgctgggagagaagcgacatccgctcc
gaggccctttcccatgcgtgcgtgcgcgccgaggtgccgttcttctgcggcgtgagctcg
ccgctcgggcatgacctcgagggcgccatcgacctgctcgccacggatgcgcccgtggca
agggaggatgcctcggcgctgctcgtcgactacaagacgggtgaccacggcctcacgctt
gggcagattcgcgagcgccacgagatgcaggcgcgcttctacgcctccgtcctgcgccag
cagggctggcgccacgtcacgtgcgccttcgtctgcgtcgagctttccgatgagctcggc
cagcccgtcgtcacccgctacgagtttggttga
DBGET
integrated database retrieval system
