Parolsenella catena: Pcatena_08970
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Entry
Pcatena_08970 CDS
T05797
Symbol
trmA_2
Name
(GenBank) TrmA family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcat03009
]
Pcatena_08970 (trmA_2)
Enzymes [BR:
pcat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Pcatena_08970 (trmA_2)
Ribosome biogenesis [BR:
pcat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pcatena_08970 (trmA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Methyltransf_11
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
BBH50310
UniProt:
A0A3G9KA10
LinkDB
All DBs
Position
985343..986659
Genome browser
AA seq
438 aa
AA seq
DB search
MRLTIERMTYGPDAIAHTQEGKTVFVSGAIAGDVVEAELVSDGKSFSKARATAVLEPSPA
RVGCDWPLASVLGCAPWAAMAYDAQLEAKRANVVDALARVGHLADAEQLVRPCEAPGSPW
HYRNKAELAFVRDGRRATLGMHALDGTSVIKVEDFPLLDTPAKGPASRIVKNVSGALGYL
AGSHDLDIERVGIRRSSRTGDVEVAIWTPTGAFPRTQACRVLESVGATSIVRVMTKGPAK
ARKVAGVERLAGAGSWSERIAGNVMRLSAPSFFQVNTAGAEKLVDLVLDALDPHENDIAM
DLYSGAGTFTLPLARYTSFVDAVESYGPAVRDLRRNLEEARLDNVDAVGGDADREFPDDE
ADIIVVDPPRAGLAENVVRQLSDQPARAIAYVSCDPATLARDLARFREIGTYEVKSVTPV
DLFPQTFHVETVTRLYRR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaccatcgagcgcatgacctacggcccggatgccatcgcgcacacgcaggag
ggcaagaccgtcttcgtgagcggcgccatcgcaggcgacgtcgtggaggccgagctcgtg
agcgacggcaagtcgttctcgaaggcccgcgccacggccgtcctcgagccctcgccggcg
cgagtcggatgcgactggccgctcgcctcggtcctgggctgcgcgccgtgggcggccatg
gcctacgacgcccagctcgaggccaagcgcgccaacgtggtggacgcccttgcccgcgtg
gggcacctcgccgacgccgagcagctcgtgaggccctgcgaggcccccggcagcccctgg
cactaccgcaacaaggccgagctcgcctttgtcagggacgggcggcgcgccacgctcggc
atgcatgcgctcgacggcacaagcgtcatcaaggtggaggacttcccgctgctcgacacg
cccgcaaaggggccggcctccagaatcgtgaagaacgtgtcgggcgccctgggctacctc
gcgggctcgcacgaccttgacatcgagcgcgtgggcatcaggcgctcgagccgcaccgga
gacgtcgaggtggccatatggacccccaccggcgccttcccgcgcacccaggcgtgccgc
gtgctcgaaagcgtgggtgccacgtccatcgtgcgcgtcatgacgaagggacccgcgaag
gcgcgcaaggtggcaggcgtggagaggcttgcgggagcgggaagctggagcgagcgcatc
gccggcaacgtgatgcgcctctcggcaccaagcttcttccaggtgaacaccgccggcgca
gagaagctcgtcgacctcgtgctcgatgccctcgacccgcacgagaacgacatcgccatg
gacctgtactccggagccggcaccttcacgctgccgctcgcccgctacacgagcttcgtg
gacgcagtggagtcctacggccccgccgtgcgagacctgcgacgcaacctcgaggaggca
cgcctggacaacgtcgacgccgtgggcggcgacgcagaccgggagttccccgacgacgaa
gccgacatcatcgtcgttgacccgccacgcgccggccttgccgagaacgtcgtgaggcag
ctctcggaccagcccgcacgcgccatcgcctacgtgagctgcgacccggccacgctcgcc
cgcgacctcgcgcgcttccgcgagatcggaacctacgaggtgaagagcgtgacgcccgtc
gacctgttcccacagaccttccacgtggagaccgtgacgcggctctatcgtcgctag
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