Parolsenella catena: Pcatena_09620
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Entry
Pcatena_09620 CDS
T05797
Symbol
gabR
Name
(GenBank) aminotransferase
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcat03000
]
Pcatena_09620 (gabR)
Transcription factors [BR:
pcat03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pcatena_09620 (gabR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_11
HTH_Crp_2
HTH_36
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BBH50375
UniProt:
A0A3G9KAS8
LinkDB
All DBs
Position
complement(1056923..1058317)
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AA seq
464 aa
AA seq
DB search
MLDYDLSARGDSALYDFLYQRIRDDIMAGAIAAGQRLPSKRALAQHLGVSVVTVEGAYAQ
LTAEGYVRSRPRSGYFACELPAGEGMPVPTSAPVVACEAVDDGADLTSSVSFSGDAARLW
ARALRQTLSSEPEGEVFAPAPAQGSMRLRRAIAAYLRQSRGLAVDPARIVVGAGAQMLDV
MISQLVGIGREFAVEDPGYVRLTRIYEACGQRVRHVPLDRQGVRVDALGDADVLHVMPSH
QFPTGRVTTIGRRYELLGWASAREGRWLVEDDYDCEFRMSGRPVPALLSADVAGNVIYTN
TFSKSLGSALRLAYMVLPEELMERYVRELGFYSSTVSSVQQVTLARILEGGEYERHVARV
RKRCRDMRDALANALRSRGDAERVRIEEADAGLHAVLAIEGVRDAEVLAERAVDLGIPGV
AFVPLERYVWDAGNAPADGRARFVVPYDALDAAAVARFADLSLC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactacgatctctccgcacgtggcgattccgcgctgtacgactttttgtaccag
cggattcgcgacgacatcatggcgggcgcgattgcggctgggcagcggcttccctcaaag
cgcgcgctggcccagcaccttggcgtgagcgttgtgacggttgagggtgcctatgcccag
ctcacggcggaggggtacgtgcgctccaggccgcgtagcggctactttgcctgcgagctg
ccggcgggggagggcatgccggtgccgacgtctgcgcctgtcgtcgcctgcgaggcggtt
gatgacggtgcggacctcacgagctcggtgtcgttctcgggagatgctgcgcgcctgtgg
gcgcgcgcactgcggcagacgcttagctcggagccggagggggaggtgtttgcgcctgcg
cctgcccagggttcgatgcggctgcgacgcgccatcgcggcttacctgcggcagtcgcgc
gggcttgcggtggatcccgcgcgcatcgttgtgggcgcgggcgcgcagatgctcgacgtg
atgatctcccagcttgtggggattgggcgcgagtttgccgtcgaggacccggggtacgtg
cgcctcacgcgcatctacgaggcctgcggccagcgcgtgcgccacgttccgctcgacagg
cagggtgtgcgcgtggacgcgcttggggacgcggacgtcttgcatgtcatgccgtcacat
cagtttcccacggggcgcgtgaccacgatcggaaggcgctacgagctgcttggctgggcc
tcggcgcgcgagggccgctggcttgtggaggacgactacgactgcgagttcaggatgtcc
ggtcgtccggtgccggcgctgctgagcgcggacgttgccggcaacgtcatctacacgaac
acgttctccaagagcctgggcagtgcgctgcggcttgcctatatggtgctgccggaggaa
ctgatggagcgctatgtgcgtgagctgggcttttactcaagcacggtgagctccgtgcaa
caggtgacgcttgcacggatcctggagggcggtgagtacgagcgccatgtggcccgcgtt
cgcaagcgctgccgcgatatgcgtgacgccctcgcgaacgcgctgcgctcgcgaggggat
gcggagcgcgtccgcatcgaggaagcggatgcgggcctgcatgccgtgctggccatcgag
ggcgttcgcgatgcggaagtcctggccgagcgggccgtggacctgggcattcccggtgtc
gccttcgtgccgctcgagcgctacgtgtgggacgcaggcaacgccccggctgacggccgg
gcccggttcgtggtgccttacgacgctcttgacgcggcggcggtcgcccggttcgctgat
ttgagcctctgctag
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integrated database retrieval system
