Parolsenella catena: Pcatena_13050
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Entry
Pcatena_13050 CDS
T05797
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcat03032
]
Pcatena_13050 (topA)
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_13050 (topA)
Enzymes [BR:
pcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pcatena_13050 (topA)
DNA replication proteins [BR:
pcat03032
]
Prokaryotic type
DNA Topoisomerases
Pcatena_13050 (topA)
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pcatena_13050 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_Ribbon_1
HC2
Zn_Ribbon_TF
HMBD
DUF6011
Motif
Other DBs
NCBI-ProteinID:
BBH50718
UniProt:
A0A3G9JZ69
LinkDB
All DBs
Position
complement(1469262..1471859)
Genome browser
AA seq
865 aa
AA seq
DB search
MKLVITEKNDAAEKIAALLSEAGKPKKDKVYDTPVYRFTREGEEWVTIGLRGHILAPDFP
TELKFTDKQGWFAISSEGEVLPADVPDGLPRPPFKKKKPFLEDGVDIKGWKVPSLPYLVW
APVEKLPAEKGIIRSLKNLAKKADSVVIGTDFDREGELIGSDALAQVLEVNPDVPVSRAR
YSAYTRGEIEHAFANLVELDQNLADAGESRQYIDLIWGAALTRYLTMARFGGFGNVRSAG
RVQTPTLALVVERERERMAFVPQDYWVIGGRACEQGADDDASFKISHAKGRFSVEEEANA
AYSHVENATSGTVTAVTKRSRTQRPPAPFNTTSLQAAAAAEGLSPARTMRLAESLYMDGL
ISYPRVDNTVYPPSLDLRATAKMLAGVPQYAPYVAKLTAEPELHATRGKQFDTDHPPIYP
TGVGDPSKLQPAEWKLYNLIARRFLATLSDPATIEGTKLAIDVAGEPFVASGDVLKVPGF
RAIYPFGLKRDEQLPALAEGDVVDVRDLSLDAKQTEPPARYSQGKLIQEMEKRGLGTKST
RASIIERLYTVKYLKNDPVEPSQLGMAIIDALHTYAPRITTPDMTSELEQDMTKVAEGTD
TQDQVVHHSRALLAGMLDALIEHKDDLGEAIADAVTADARVGTCPKCGRDLVVKSSAKTR
GSFVGCMGWPDCDVTYPLPSGVRYEAIEGEAGVCPECGAPRIKCKPFRAKAYEICVNPKC
PTNYEPDLKVGECKVCAEAGRHGDLIAHKSERSGKRFIRCTNYDECGVSYPLPARGKLTA
TDETCPECGAPMIIVETARGPWKKCVNMDCPTNERKTPARGRAAAGKASGAKKAATKKAT
AKKSAAKKTTAKRSSSKKNSSEAGE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcatcaccgagaagaacgacgccgccgagaagatcgcggccctgctctct
gaggctggtaagcccaagaaggacaaggtctacgacacccccgtctaccgcttcacgcga
gagggggaggagtgggtgaccatcggcctgcgcggccacatcctggcacccgacttcccg
acggaactcaagttcacggacaagcagggatggttcgccatctcctcggagggggaggtc
cttccggccgacgtgccggacggcctgccccgtccgccgttcaagaagaagaagccgttc
ctcgaggacggcgtcgacatcaagggctggaaggtcccgagccttccctacctcgtgtgg
gcgcccgtcgagaagctccccgccgagaagggcatcatccgctcgctcaagaacctcgcc
aagaaggccgactccgtcgttatcggcacggacttcgaccgcgagggcgagctcatcggc
tcggacgccctggctcaggtgctcgaggtgaacccggacgtgcccgtctctcgcgcgcgc
tactccgcctacacccgcggcgagatcgagcatgcgttcgcgaacctcgtcgagcttgac
cagaaccttgccgacgccggcgagagccgccagtacatcgacctcatctggggcgcggcg
ctgacgcgctacctcacgatggcgcgctttggcggctttggcaacgtgcgcagcgccgga
cgcgtgcagacgcccacgctcgccctcgtcgtggagcgcgagcgcgagcgcatggcgttc
gtgccgcaggactactgggtcattggcggccgagcctgcgagcagggcgccgatgatgac
gcctcgttcaagatctcgcacgcaaagggacgcttctcggtcgaggaggaggccaatgcc
gcgtactcccacgtggagaacgcgacgagtggcaccgtgacggccgtgacgaagcgctcg
cgcacgcagcgtccgcccgcgccgttcaacacgacgagcctgcaggccgccgcggccgcc
gagggcctctcgcccgcgcgcacgatgcgtctggccgagagcctctacatggacggcctc
atctcctatccgcgcgtggacaacacggtctacccgccctcgcttgacctgcgcgccacg
gccaagatgctcgcgggcgtgccgcagtacgcgccctacgtggccaagctcacggccgag
ccggagctccacgcaacgcgcggcaagcagttcgacacggaccacccgcccatctatccc
acgggcgtgggcgacccctcaaagctccagcccgccgagtggaaactctacaacctcatc
gcgcggcgcttcctcgccacgctctccgaccccgcgaccatcgaggggacgaagctcgcc
atcgacgttgccggcgagccgttcgtggcctccggtgacgtgctcaaggtgccggggttc
cgcgccatctacccgtttggcctcaagcgagacgagcagctcccggcccttgccgagggt
gacgtcgtggacgttcgcgacctctcgcttgacgcgaagcagaccgagccgcccgctcgc
tacagccagggcaagctcatccaggagatggagaagcgaggcctgggcacgaagtccacg
cgcgcgagcatcatcgagcgtctctacaccgtgaagtacctcaagaacgatcccgttgag
cccagccagctcggcatggccatcatcgacgccctgcacacgtatgcgccgcgcatcacg
acgccggacatgacgagcgagctcgagcaggacatgacgaaggtcgccgagggcaccgat
acgcaggaccaggtggtccaccactcccgcgcgctgctcgccggcatgctcgacgcgctc
atcgagcacaaggacgacctgggtgaggccatcgccgacgccgtcacggcggacgcccgc
gtgggcacctgccccaagtgcggccgcgacctcgtcgtgaagtcgagcgccaagacccgc
ggcagcttcgtgggatgcatgggctggcccgactgcgacgtcacctacccgctcccgagc
ggcgtgcgctacgaggccatcgagggcgaggcgggcgtgtgccccgagtgcggcgcccca
cgcatcaagtgcaagccgttccgcgccaaggcctacgagatctgcgtgaaccccaagtgt
cccaccaactacgagcccgacctcaaggtgggcgagtgcaaggtctgcgccgaggctggc
cgccacggtgacctcatcgcccacaagtccgagcgctccggcaagcgcttcatccgctgc
acgaactacgacgagtgcggcgtgagctatccgctgcccgcgcgcggcaagctcacggcc
accgacgagacgtgccccgagtgcggcgcccccatgattatcgtggagacggcccgcggc
ccgtggaagaagtgcgtgaacatggactgccccaccaacgagcgcaagacgcccgctcgt
gggcgcgccgccgcgggcaaggcctcgggcgccaagaaggccgccacgaagaaggccact
gccaagaagtctgcggccaagaagacgactgccaagcgctcgagctcgaagaagaactcg
agcgaggccggcgagtag
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