Parolsenella catena: Pcatena_13530
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Entry
Pcatena_13530 CDS
T05797
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_13530
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pcatena_13530
Archaeal homologous recombinant proteins
Pcatena_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_21
Laminin_II
LXG
Rad4
Motif
Other DBs
NCBI-ProteinID:
BBH50766
UniProt:
A0A3G9K2Q5
LinkDB
All DBs
Position
complement(1521699..1524962)
Genome browser
AA seq
1087 aa
AA seq
DB search
MRPAKLTISAFGPYAGKVTVDFERLGGEGLYLICGDTGAGKTTIFDAISFALYGVASGTD
RTARSLRSDFAAPGAETYVELEFEHRGGRYVIRRNPEYERPKKRGSGMATQLADATLSHE
GEPPVTGTRAVDKAIDELLGIDRNQFSQIVMIAQGDFRRLLKADTKERSAIMRKLFGTQP
YLKFQDALAARSHKLEDQAKSTRELLLALVPTIQVTGEERTGRLAGLVDSEAPDADAALA
LLREQGAEDDAELACLEAKRARGAAEVGRLSGLAERASQLERQRVELRGTREELESARAA
VEPALEAVDEQNGRADKRRRLADRAAVMEQELSRFSELASAEDEERRAESDLSKARRVSE
GARGALDRADASLVAARDAAANLSDAPAALARAQAERSEAARLLDEARKTLDGATELARR
RAALPALRAAAAGAQDALTGLEDASRDLAEELARARDERDGLKDTPAALERARSARDELS
RQVDDVRLWYRSATNREKALTEANRRLEDARSAYAASAAKMEQARAAHADRQRAFLDGQA
GVLARGLAFGAPCPVCGSLEHPHPAALASEVPTQEQVDAAAAALDRATAQATEASAAASS
ALANAEACEAELARERESHGSSDELLAKGKELARDLEAAKGEAKAAEGRVGELRDAEALV
TRLERKSVALSAELESARTACDEARGQLSDAEASCREYAATLVEADEGAARAGVEEARAC
LSRAEKALATASAEAKRLESARELVSRLEAGRPALAAACDEAAAGEAQASSRQADAAATV
RTIRAGLSHASAEELKGERARVVREIEAIDAAKRAADERLASAQDAVTRLTERVDSIVAQ
VRHLSEGGDVDASQVSAELSAAREAQTAVEDERARVSARAGSNDRLAGELERLGEGARDV
AARYAEMDALARTATGRLAGKQRLSFETYLQARWFDRVLAAANRRLSTMTENRYELVRHK
GERRGGGAAQTGLDLDVLDSFTGKPRDASSLSGGETFKASLALALGLSDVVQAHAGGIEL
DTMFVDEGFGSLDQESLALTVRVLTGAENSNKLVGIISHVDELRASIDRKIVVERGRSGS
TLRIEEG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagccaagcttaccatcagcgcgttcgggccctacgcgggcaaggtgaccgtc
gacttcgagagactcggcggcgagggcctctatctcatctgcggagacacgggcgcgggc
aagacgaccatcttcgacgccatatcgtttgccctgtatggcgtggcgagcggcacagac
cgcacggcgcgcagccttcgcagcgactttgcggccccgggtgctgagacgtacgttgag
ctcgagttcgagcaccgcggggggcgctacgtcatacgtcgcaacccggagtacgagcgc
cccaagaagcgcggcagtggcatggcgacgcaactggccgacgccacgctcagccacgag
ggggagccgcccgtcacgggcacacgcgccgtcgacaaggcaatcgatgagcttctcggc
atcgaccgcaaccagttctcgcagatcgtcatgatcgcgcagggagacttccgtcgcctg
ctcaaggcggacacgaaggagcgctccgccatcatgcgcaagctctttggcacgcagccc
tacctcaagttccaggacgcgttggctgcgcgcagccacaagctcgaggaccaggccaag
tccactcgcgagctcctgcttgccctcgttcccacgattcaggtgacgggcgaggagcgc
accgggcgcctcgcgggactcgtggactccgaggcgcccgacgcagacgccgcccttgcg
ctgctgcgcgagcagggtgccgaggacgacgcggagcttgcatgcctcgaggccaagcgg
gctcggggcgcggccgaggtggggcgcctctccgggcttgccgagcgcgcgagccagctc
gagcggcagcgtgtcgagctgcgtgggacgagggaggagcttgagagtgcccgcgctgcc
gtggagccggccctcgaggctgttgacgagcagaacgggcgagcggataagcgccgacgc
cttgcggaccgtgcggccgtgatggagcaggagctctcgaggttctccgagctggcgagc
gccgaggacgaggagcgtcgcgcggagtctgacctgagcaaggcccgacgggtgtccgag
ggcgcgcgtggtgcgctggaccgggccgatgccagcctcgtggcggcccgcgacgcggcc
gcgaatctctcggacgcgccggccgccctcgctcgcgcccaggccgagaggtccgaggcc
gcgcgcctgctcgatgaggcgagaaagacgcttgatggcgcgacggagctcgctcgcagg
cgagcagcactgcctgcgctgcgcgccgccgccgcgggcgcacaggacgccctgacgggc
cttgaggatgcttcgcgcgatcttgcggaggagcttgcgcgcgcacgtgatgagcgcgat
gggctcaaggatacccccgcggcgctcgagcgcgctcgctccgctcgcgacgagctctcg
cgccaggtcgacgacgttcgcctttggtatcggagcgcgacgaatcgcgagaaggcgctg
accgaggcaaatcgcaggctcgaggacgcaaggagcgcctatgccgcgagcgcggccaag
atggagcaggcccgtgccgcgcatgccgacaggcagcgcgccttccttgacggccaggcg
ggcgtgcttgcgcgcgggctggcctttggcgcgccctgccccgtgtgtgggtcgcttgag
catccgcaccccgcggcccttgcgagcgaggttcccacgcaggagcaggtggatgcggcg
gccgccgcgctcgatcgcgcgaccgcgcaggcaaccgaggcgtccgccgcggcctcgtct
gcccttgccaacgccgaggcatgcgaggcggagcttgcgcgggagcgcgagagccatggg
agctcggacgagctgctcgcaaagggaaaggaacttgctcgcgacctcgaggctgccaag
ggagaggccaaggcggcagagggacgcgtgggcgagctgagggatgcggaagctctcgtc
acccgtcttgagagaaagtccgtggcgctctctgcggagctcgagtctgctcgcaccgcc
tgtgacgaggcgcggggccagctgtcggacgccgaggcatcgtgtcgcgagtatgcggcc
acgctcgtcgaggcggacgagggcgctgcgcgcgctggcgtggaggaggcccgggcgtgc
ctgtcgcgtgccgagaaggcgcttgcgacggcgagcgcggaggcgaagaggctggagtct
gcgagggagctcgtctcgaggctcgaggccgggcgtcctgccttggctgctgcctgcgac
gaggcggctgcgggcgaggcccaggccagctcgcgccaggcggacgccgcagccacggtg
cgcactatccgtgcgggcctttcgcatgcgagtgccgaggagctcaagggcgaacgcgcg
agggttgtccgggagatcgaggcgattgacgcggccaagcgagcggcggacgagaggctt
gcgtctgcccaggatgcggtcacacgcctcaccgagcgcgtggactcgatcgtggcgcag
gtcagacatctgagcgagggtggagacgtcgatgcgagccaggtctcggccgagctgtct
gccgctcgcgaggcgcagacggccgtcgaggacgagcgcgcccgggtgtcggcgcgggca
ggctcgaacgaccggctcgcgggcgagctcgagaggcttggcgagggtgcccgtgacgtt
gcggcccgctatgccgagatggacgcgctcgcgcgtacggccacgggacgccttgccggc
aagcaacgcctgagcttcgagacctacctgcaagcacgttggttcgaccgcgtgctcgcg
gcggccaacaggcgtctctccacgatgacggagaaccgctacgagctcgtgcgtcacaag
ggcgagcgccgtggcggcggtgcggcccagacgggccttgacctcgacgtcctcgactcg
ttcacgggcaagccccgtgacgcctcgtcgctctcgggtggcgagacgttcaaggcgtcg
cttgcgctggcgcttgggctctcggacgttgtgcaggcacatgccggcggcatcgagctc
gacacgatgttcgtggacgaggggttcggctcgctcgaccaggaatcgcttgccctcacg
gtgcgcgtgctcacgggtgccgagaacagcaacaagctcgtgggcatcatcagccacgtc
gacgagctgcgcgcgagcatcgaccgcaagatcgtcgtcgagcgaggacgcagcggctcg
acgctgcgcatcgaggagggatag
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