Parolsenella catena: Pcatena_13540
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Entry
Pcatena_13540 CDS
T05797
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcat
Parolsenella catena
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_13540 (sbcD)
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pcatena_13540 (sbcD)
Archaeal homologous recombinant proteins
Pcatena_13540 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
ACT
Motif
Other DBs
NCBI-ProteinID:
BBH50767
UniProt:
A0A3G9JZ33
LinkDB
All DBs
Position
complement(1524963..1526132)
Genome browser
AA seq
389 aa
AA seq
DB search
MRLLHIADLHIGKRVCEFSMLEDQRHVLSQVVGLVSERGVDVVLVAGDLYDKSMPSAEAV
ALVDWFLESLAATGAQAVVIPGNHDSAERVAYASGLLGRQGIHVAPVYDGHIEPVRLADE
RGAVDVWPIPYLHISTVRHYFPDEQISNYTDALRVAIDACDLRRIDDEGRLVRNVAVAHQ
FVTAGGVSPERCDSELSLGGMDNVDASVFDAFDYVALGHVHGPQRVGRDAVRYAGSILKY
SLSEWRGQKSAVLVELGEAGVEPSTELVPLVPLHDLRRVRGPLERLVSPEVAGASDVSRE
DYLYAVLTDENPEVDAMARLRNVYPNVMSLEYDNARTRAAGIADDAAPAADSASPLELFC
DFYEQQNGSGLTEGQLAAVTEELERIEAL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttctgcatatcgcggacttgcacataggcaagcgcgtctgcgagttctccatg
ctggaggaccagcgtcacgtgctgtcgcaggtggtggggctcgtgagcgagcgcggggtt
gacgtggtgcttgtcgccggggacctgtatgacaagtccatgcccagcgccgaggccgtg
gcgctcgtggactggttcctcgagagcctggcggcaacgggcgcccaggccgtggtcatc
cccggcaaccacgactccgcggagcgcgtggcctacgcatccggccttctcggtcgccag
gggattcatgtcgctccggtgtacgacgggcatatcgagcccgtgcgccttgcggacgag
cgtggcgcggtggacgtgtggcccattccctacctgcacatctcgaccgtgcgccactat
ttcccagacgagcagatctcgaactacacggatgccctgcgcgtggcaatcgatgcctgt
gacctgcggcgcattgatgacgaggggcgcctggtgcgcaacgttgccgtagcgcaccag
ttcgtgacggccggcggcgtctctcccgagcgctgcgactcggagctgtccctgggcggc
atggacaatgtggacgcgagcgtctttgacgcgttcgactacgtggctctcggacacgtc
cacggccctcagcgtgtgggccgtgacgcggtgcgctatgcgggctccatcctcaagtat
tcgctctctgagtggcgtgggcagaagtccgccgtgctcgtggagctgggagaggctggc
gtggagccgagcaccgaactcgttcccctcgttcccctccatgatctgcgccgcgtccga
ggcccgcttgagcggctcgtatcgcccgaggtggcgggtgcgagcgacgtgagccgcgag
gactatctctatgcggtgctcacggatgagaatcccgaggtggacgccatggctcgcctg
cgcaacgtctaccccaacgtcatgagcctcgagtacgacaacgcgcgcacccgtgcggcg
ggcatcgccgatgatgccgcgcccgccgccgactcggcgagtccgctcgagctgttctgc
gacttctacgagcagcagaacggcagcggcctcacggaggggcagctcgcggccgtgacg
gaagagctcgagcgaatcgaggcgctctag
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