Parolsenella catena: Pcatena_13610
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Entry
Pcatena_13610 CDS
T05797
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcat
Parolsenella catena
Pathway
pcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pcatena_13610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcat03019
]
Pcatena_13610 (recQ)
03400 DNA repair and recombination proteins [BR:
pcat03400
]
Pcatena_13610 (recQ)
Enzymes [BR:
pcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pcatena_13610 (recQ)
Messenger RNA biogenesis [BR:
pcat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pcatena_13610 (recQ)
DNA repair and recombination proteins [BR:
pcat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pcatena_13610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RQC
RecQ_Zn_bind
HHH
HHH_5
ResIII
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
BBH50774
UniProt:
A0A3G9K838
LinkDB
All DBs
Position
1530177..1532057
Genome browser
AA seq
626 aa
AA seq
DB search
MSARPIDILHQTFGYPTFRPHQERIVEAAIGGRDVMAVMPTSAGKSICYQVPALALGGLS
LVVSPLISLMSDQVMALRELGVPAACLNSSLGAHEREQLLGDMARGLLAIVYVAPERLDD
PAFLDIVRSHGLSLLAVDEAHCISQWGNDFRPSYQRIRDFIEALPTRPPVMALTATATRQ
VREDIEGTLGLHDPLRVVASFDRPNLSFSVERPANRRAKDESLLAFVREREGKSGIVYCM
SRRAVEDVCDMLRENGIAATRYHAGLPAEERERNQADFIYDRAPVMVATNAFGMGIDKSN
VSYVAHYNLPLSLENYYQEAGRAGRDGTRAECLLLYSPGDVHTAEFLLSRTERTDLTPEQ
LQAMREADEQRLRQMVFYATTTDCLRSFILRYFGEEAPAYCGNCGNCLADYEEVDERTNA
LKVLSCVARVRQHALACGSPATSVGAGSIVDILRGSRAQRVLERGWDELSTYGIMADVPV
PRIRALIDELVYREFLTRTQGDYPTLALAGRGVVFMKGDKPFIMRVAKGRPKAPRRERRS
RGMAGEDMPDLTPEQAELFERLRALRTELAREQQVPPYLIFNNATLEDMCRKRPATREEL
LEVSGVGAKKAERYGEAFLQLIAQED
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgccccatcgacatcctgcaccagacgtttggctacccaacgtttcgcccc
caccaggagagaatcgtggaggccgccatcggcgggcgcgacgtcatggccgtcatgccc
acgtccgccggaaagtccatctgctaccaggttccggcgcttgcgctcggcggcctgtcg
ctggtggtgtcgccgctcatctcgctcatgtcagaccaggtcatggccttgcgcgagctc
ggtgttcccgcagcgtgcctcaacagctcacttggcgcccatgagcgcgagcagctgctt
ggcgacatggcgagggggctgctcgcaatcgtctacgtggccccggagcgccttgacgac
ccggcgtttctcgacatcgtccgcagccatggcctcagcctgctcgccgtggacgaggca
cactgcatctcccagtgggggaacgacttccgccccagctatcagcgcatccgcgacttc
atcgaggccctgcccacgcgtccgcccgtcatggcgctcacggcaaccgccacacgccag
gtgcgcgaggacatcgagggcacactcgggcttcatgacccgctgcgcgtcgtggcgagc
ttcgaccgccccaacctctcgttttccgtggagcgccccgcgaacaggcgcgcaaaggac
gagtcgttgctcgcattcgtgcgggagcgcgagggaaagtcgggcatcgtctactgcatg
agccgccgagccgtcgaggacgtctgcgacatgctgcgcgagaacggtatcgccgccacg
cgctaccacgcaggtctgccggccgaggagcgcgagcgcaaccaggccgacttcatctat
gaccgcgcccccgtcatggtggccacgaacgcctttggcatgggcatcgacaagagcaac
gtgagctacgtcgcccactacaacctgccgctctcgctcgagaactactaccaggaggcg
ggtcgcgccggccgagacgggacgagggccgagtgcttgctgctctactcgcccggagac
gtccacaccgcggagttcctcctgagtcgcaccgagcgcacagacctcacgcccgagcag
ctccaggccatgcgcgaggcagacgagcagcggctgcgccagatggtcttctacgcgacc
accacggactgcctgcgctccttcatcctgcgctactttggcgaggaggctcccgcatac
tgcggcaactgcggcaactgcctcgcggactacgaggaggtagacgagcgcacgaacgcg
ctcaaggtcctgagctgcgtggcgcgcgtgcgacagcacgcactcgcctgcggcagcccg
gccacgagcgtgggcgcgggctcgatcgtggacatcctgagaggctcgcgcgcccagcgg
gtcctcgagcgtggctgggacgagctgtccacctacggcatcatggcggacgtgcccgtg
ccgcgcatccgcgccctcatcgacgagctcgtctaccgggagtttctcacgcgcacgcag
ggagactacccaacccttgcgctggcgggccgcggtgtcgtgttcatgaagggcgacaag
cccttcatcatgcgcgtcgccaagggcaggcccaaggccccgcgccgcgagaggcgcagc
cgcggcatggccggcgaggacatgccagacctcacgcccgagcaggccgagctgttcgag
aggctgcgggcgcttcgcaccgagctcgcgcgcgagcagcaggtgccgccctacctcatc
ttcaacaacgccacgctcgaggacatgtgccgcaagcgtcccgcaacgcgcgaggagctc
ctcgaggtatcgggcgtgggtgccaagaaggccgagcggtatggggaggcgttcctccag
ctcatcgcacaagaagactag
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