Candidatus Parvibacillus calidus: HWD63_03170
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Entry
HWD63_03170 CDS
T10915
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWD63_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcau03021
]
HWD63_03170
03400 DNA repair and recombination proteins [BR:
pcau03400
]
HWD63_03170
Enzymes [BR:
pcau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWD63_03170
Transcription machinery [BR:
pcau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWD63_03170
DNA repair and recombination proteins [BR:
pcau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWD63_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QLH28475
UniProt:
A0A7D5MEJ6
LinkDB
All DBs
Position
716095..717093
Genome browser
AA seq
332 aa
AA seq
DB search
MSILNFQKPDKIILQKSTDFDGVFEFKPLEPGFGQTIGNSLRRVLLNSLEGFAISAIRIG
GVDHEFSTIPGVVEDVIEIILNLKQVRLKLQMKDEDIQNXKIYLTLRGKEQFLSGDIEQF
TNVFKVMNPDLLICQMEPSVTLEIELTITKGRGYVAADEQPERESVIGVIPVDSIYTPVK
NVAYQVSNTRVGQRTDYEKLTIEVKTDGTIHPEDAVKEASRILIQHLMLITDENISFDDA
AKGEEDVVDEHILHMRKLLKTSLEDLDLSVRAYNCLKAAKINSLGEMVQYETHELLKFRN
FGKKSLVEIEELLSTKGLHFGMDLSKYKLEEE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattaaattttcaaaaacctgataaaattatacttcaaaaatccactgacttc
gatggtgtttttgaatttaaaccgttggaaccgggcttcggtcagacaatcggtaactca
ttgagaagagtactcctcaactctctggaaggtttcgctatttcagcaatcagaattggc
ggtgttgaccacgaattttcaaccattcccggagttgtagaagatgtcattgagatcatc
ctgaatcttaagcaggtccgtttgaagctgcaaatgaaggatgaagatattcaaaacgan
aaaatttacctcactctccgcggtaaggaacaattcctttccggtgacattgaacagttt
accaatgtgttcaaagtgatgaacccggatctgcttatttgtcagatggaacccagtgtt
acattggagattgaattgaccatcacaaaaggccggggatatgtcgccgcggacgaacaa
ccggagcgtgaaagtgtcataggtgtaattcctgtggattctatttatactccggttaag
aatgtagcttaccaggtttccaatacaagggtaggacaacgtacagactatgagaagttg
accatcgaggtgaagacagatggtacaatacatccggaggatgcagtgaaggaggcttca
aggattttgatccagcatctgatgctcattacagatgaaaatatttcatttgatgatgct
gctaaaggtgaggaagatgttgtcgatgaacatatcctgcacatgcgtaagttgttgaag
acttctctggaggatctggatctgtcggtaagagcttacaactgtctgaaagctgccaaa
atcaattccctgggtgaaatggtacaatatgaaacgcatgaattactgaagttccgcaat
tttggtaagaagtctttggtcgagatcgaagaattactttctacaaaaggactgcacttt
ggtatggacctttccaaatacaagctggaagaagaataa
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