Candidatus Parvibacillus calidus: HWD63_04825
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Entry
HWD63_04825 CDS
T10915
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
pcau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWD63_04825 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWD63_04825 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_15
AAA_25
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
Viral_helicase1
VASP_tetra
Motif
Other DBs
NCBI-ProteinID:
QLH28757
UniProt:
A0A7D5RGJ3
LinkDB
All DBs
Position
complement(1070556..1073420)
Genome browser
AA seq
954 aa
AA seq
DB search
MPQKLIKSENLHPGHMSQSIEVIDAYEHNLKHIDVSIPRDKLVVITGISGSGKSSLAFDT
IFAEGQRRYIETFDNYTRMMIGGLERPAVEKINGLSPVISIEQKTTGWNPRSTLGTVTEV
YDLLRLLYARASEAYSYISGKKMVKFSEEEIIDAIRQEMKDHSIMILAPIVKGRKGHYKE
LFDQVRKQGYTKVRIDGEITSLTLGMQVDRYKIHDIETVIDKLTVNDSNLSRLISSIQLA
LKMSDGLVFVLRTDNESVRLFSKNLADPENKLAYEEPNPNTFSFNSPYGACPHCSGLGEM
IKVDLNKVIPDKNLSINDGGISPFGLPRETNYYNQLRDIAKKHRFTFATPIKDIPEAAIN
EILYGEYSKNAERFDRPFAYNEYTYDIQESGLVRILEVCYHESNSERIRQWAEDYMSLEL
CPECHGDRLKIESLHYKIGEXNIAELNRMSLKDLAIWLDNVDSVLNDRQRSIARDVLKEI
SMRVYFLNHVGLDYLTLNRSAXTLSGGESQRXXLANQIGTQLSGVLYILDEPSIGLHQRD
NNRLIKALKELVEIGNTVLVVEHDKDIMLASDYIIDIGPGAGIHGGNITGFGKPEEFLKL
DTTTAQYLSGVQEIKIPEQRRKGNGHSLILKEASGHNLKAIDLEIPLGKLVLVTGVSGSG
KSSLITETLYPILRKHFYNSVAKPLPYQSIEGLEHLDKVIEIDQAPIGRTPRSNPVTYIN
VFSEIRSIFANLPESKIRGYKVGRFSFNVAGGRCPVCEGGGMRVIEMNFLPDVMVECDSC
HGKRYNKETLEVLYKGKSIGDVLQMTVDEGVEFFQNIPKIHRKLKTLQDVGLGYIALGQQ
STTLSGGEAQRVKLAEELSKXDTGNTLYILDEPTTGLHFSDIQQLLNVLQALVDKGNTVL
IIEHNMDIIKCADHVIDVGPXGGSGGGTIVATGTPEEIAENKRSITGQFLRKEL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaaattaattaaatcagaaaaccttcaccctggccatatgtcacagtccatt
gaagtaatcgatgcttacgagcataatctcaagcatatagatgtttccatccccagagac
aagctggtggtcatcaccggtatcagcggaagtggaaagtcaagtcttgccttcgacacg
atatttgctgagggacagcgacgttatattgaaacttttgacaattatacaaggatgatg
atcggaggcctggaaaggcccgctgtcgaaaagatcaacggcttgtcacccgtcatctcc
atagaacagaagaccaccggctggaacccgcgctctacacttgggacagtaacggaagta
tatgacctgctcaggcttctttatgcgcgagcctcggaagcctactcttacatcagtggc
aagaaaatggtcaaattttccgaagaggaaatcatcgacgcaatccggcaagaaatgaaa
gaccattctattatgatcctggcgccaatcgtcaagggcaggaaaggtcattataaggaa
ctgttcgatcaggtcaggaaacaaggctacaccaaagtcagaattgacggcgaaataacc
tctctgacgcttggcatgcaggttgatcgatacaagatccacgatattgaaaccgtcata
gacaaattgacggtcaatgattccaatctttcaagacttatctcatcgatccagttagcc
ttaaaaatgagcgatggcttagtctttgtcctgaggactgacaatgaatccgtccgactg
tttagcaaaaacctcgctgatcctgaaaacaaactggcatatgaagaacccaatcccaat
actttctccttcaactcaccctatggagcatgcccacattgcagtggcctgggtgaaatg
attaaggtagatcttaataaggttattccggacaaaaatttgtctatcaatgatggaggc
atctctcctttcggacttcccagagaaaccaattattacaaccagcttagggatatcgcc
aaaaagcatcggtttacattcgccactcctatcaaagacataccagaagcggcaataaac
gagatcctctatggtgaatacagtaaaaatgcagaacgttttgatagaccatttgcctac
aatgagtacacctatgacatccaggaatcaggcctggtaagaatccttgaggtttgttat
catgaatcaaattcagagagaatccgtcaatgggcagaagattatatgtcgcttgagctt
tgtccggaatgtcatggagatcgacttaagatagaatctctccattacaagatcggagaa
naaaatattgccgaactcaaccggatgtcactcaaagacctcgccatctggcttgacaac
gttgattctgttttgaatgaccgtcaaaggagtatagcacgggatgtcctgaaggaaatt
tccatgcgggtatactttctcaatcatgtgggactcgattaccttacactcaaccgaagc
gccnggaccctttcaggtggagaatcacagcggnccngcttagccaatcagattggaacc
caattgtccggagtgctttatatcctggacgaacccagtattggattgcatcaacgagac
aacaacaggttgataaaggcgttgaaggaactggtggaaattggcaataccgtcttggtc
gttgaacacgacaaggatatcatgctggcctctgactatatcatcgacattgggccggga
gccggaatacatggcggtaatatcaccggttttggcaagccggaagaattcctcaagttg
gataccactacggctcaatacctttccggcgttcaggaaattaaaatccctgaacaaaga
aggaaaggcaatggtcattccttgatactgaaagaagcatccggtcacaatctgaaggct
attgaccttgagatacctttgggcaaattagtcttagtgacgggcgtatccggcagcggc
aagagctcactcatcacagaaacgctctatccgatactgaggaaacatttctacaacagc
gtagcaaaaccactaccctaccaatctatagaagggctggaacatctggacaaagtgata
gaaatagatcaggcgccaatagggcggacaccacgctccaacccggtcacctatatcaat
gtattctccgagatacgaagcatcttcgccaaccttcccgagtccaagatcagaggttat
aaggtcggccgcttttctttcaatgtagccggtggcagatgtccggtatgtgaaggcgga
ggcatgagggtcatagaaatgaattttcttcccgacgtcatggtggaatgcgacagttgc
catggcaaaagatacaacaaagagacactggaagtattgtataaaggcaaatccattggt
gatgtccttcaaatgacagttgatgaaggagtcgaattcttccagaatataccaaaaata
catcgtaaactgaagactcttcaggatgtcggattgggctatatagccctcggccaacaa
agcacgacactaagtggtggtgaagcccaacgtgtgaaactggctgaagaactctccaaa
naagatacaggcaataccctctatatactggatgaacccaccaccggactgcatttcagc
gatattcaacaactcctcaatgtacttcaggctctggttgataagggaaatacagtcctc
attatcgaacacaatatggacatcatcaaatgtgcggatcatgtgatcgatgtaggtccg
natggcggttcaggcggtggcaccattgttgcaaccggaacacctgaagaaatagctgaa
aataagaggagcatcaccggacaatttttacgaaaggagctttaa
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