Candidatus Parvibacillus calidus: HWD63_05250
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Entry
HWD63_05250 CDS
T10915
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau00470
D-Amino acid metabolism
pcau00550
Peptidoglycan biosynthesis
pcau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HWD63_05250 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HWD63_05250 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcau01011
]
HWD63_05250 (murD)
Enzymes [BR:
pcau01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HWD63_05250 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcau01011
]
Precursor biosynthesis
Amino acid ligase
HWD63_05250 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
Pyr_redox_3
C1_PlyCB
FAD_oxidored
CPDase
Motif
Other DBs
NCBI-ProteinID:
QLH28832
LinkDB
All DBs
Position
1177357..1178664
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AA seq
435 aa
AA seq
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MKVVVIGAKESGVGAALLCKQMGYDVLVSDNGPVIEPFRMELERSKIAFEENGHSSGMSD
RFDLMVISPGVPSTVPVIRDFANSGKEVISEIEFAWRHIGDGKVIGITGSNGKSTLSSLI
YHVMEELDRDVTLVGNIGYSFAKMIATTRSQYYVCELSSFQLESIVDFRPHVAIITNITP
DHLDRYDHSMEKYAAAKFRITENQTSSDVLIINADDPFSMDYFKQVETEAQIKYISSDRI
SVDSYISGSGKVYDLSNSQLRGRHNRANMAQAIEALEFIGEKQYQIEQNISSFNGLAHRL
EYVATVGGVDFINDSKATNVDSVMYALDAMTQPIVWIAGGTDKGNEYNAIMPLVKDKVKH
LICLGIDNTKLIDSFHNIVGSIEEAGSAEEAVRKAMKAATPGDVVLLSPACASFDLFKNF
EDRGEKFXKAIRKLT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtagtcataggagctaaagaaagtggagttggagcagcattgctgtgcaag
cagatgggatatgacgtcctggtcagtgacaatggaccagttatagagccttttcgaatg
gagttagagagatcaaagattgcttttgaggaaaatggacattcatccggaatgagcgat
cggtttgacctgatggttatcagtcctggtgttccttcaacagtaccagttatccgtgat
ttcgcaaatagtggaaaggaagtaatttctgagattgaatttgcctggagacatattggt
gacgggaaggtaataggtattacaggatctaatggcaaaagcacactttcttctttgata
tatcatgtgatggaagagttggatcgggatgttaccctggttggtaatattggttacagc
tttgccaaaatgatagccactacgcgttcacaatactatgtatgcgagttgagtagcttc
cagttggagagtattgttgattttagaccgcatgtggcaatcattaccaatattacgccg
gatcatttggacagatatgatcatagcatggagaaatacgcggcggctaagttcaggatt
acggagaatcaaacctcatcagatgtactcatcattaatgccgatgatcccttttcaatg
gattattttaagcaagttgagacagaggcccagattaaatatatctcctcagatcggatt
tctgttgacagttatatttccgggtctggaaaggtgtatgacctgagtaacagtcagttg
agaggaaggcacaatcgtgccaatatggcacaggctattgaagcactggagtttataggt
gagaagcaatatcaaatcgagcagaatatctcgtccttcaatggtctggcacatcggctt
gagtatgttgctacggtgggtggtgttgattttatcaatgacagtaaggctactaatgtc
gattcagtcatgtacgcgctggatgctatgactcagcctatcgtgtggattgccggnggg
acagataaaggcaatgagtacaatgctatcatgcctttagtaaaggataaggtcaagcat
cttatttgccttggtattgacaataccaaactcatcgacagtttccataatatcgtgggc
agtatagaggaggcaggctcggcagaagaagcagtgcgtaaagctatgaaggctgcaact
ccgggtgatgtggtattgctttcaccggcatgtgcaagtttcgacctgttcaaaaacttt
gaggataggggcgagaaatttaanaaggctatcagaaaactaacataa
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