Candidatus Parvibacillus calidus: HWD63_06285
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Entry
HWD63_06285 CDS
T10915
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03030
DNA replication
pcau03410
Base excision repair
pcau03420
Nucleotide excision repair
pcau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWD63_06285 (polA)
03410 Base excision repair
HWD63_06285 (polA)
03420 Nucleotide excision repair
HWD63_06285 (polA)
03440 Homologous recombination
HWD63_06285 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcau03032
]
HWD63_06285 (polA)
03400 DNA repair and recombination proteins [BR:
pcau03400
]
HWD63_06285 (polA)
Enzymes [BR:
pcau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWD63_06285 (polA)
DNA replication proteins [BR:
pcau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HWD63_06285 (polA)
DNA repair and recombination proteins [BR:
pcau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HWD63_06285 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWD63_06285 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
QLH29018
LinkDB
All DBs
Position
complement(1423106..1425946)
Genome browser
AA seq
946 aa
AA seq
DB search
MSSDKRIFFIDGHAMVYXAHYAFINRPLMNSKGQNVSAINGFIRAIWDLIVNQXPTHLGV
VFDPKGGTFRSDLYEEYKAQRDAQPEDISFAIPYIIKILEGMNIPVEIIPNYEADDVIGT
LAKXAEKQGFEVYMVTPDKDYAQLVSENIFQYKPARFGNDIEILGVEEVLXKWEIKRVDQ
VIDILGLMGDSVDNIPGLPGVGPKTAVKLIEEFDNLENVLANADKMKGKLQETVQTKADL
ARLSKTLATIHIDAPVDFDYNHYEVNEFNNDVLLEVFKELEFKTLAATILSYNSKTVGKS
TSTTKAASTKKQDSEVYQGSLFDNKDTVDEKETLSEELSNAQFNITNTPHEYKLVATDDD
WNALRTEITGRKFFCFDTETTSLDPIVAELVGISISTEAHKAWYISVPEDQQVAQVIANQ
LKPLWENPEIDKIGQNLKYDISVLKXYGIDIKGRLFDTMLIHYLIEPELRHGMDYMAEAY
LKYRPIPITELIGEXRERQLSMRDVALEQIKEYASEDADITFQLYNYLVPGLKEIQAYDL
YNNIEGKLITVLADLEMAGVNIDAEYLNHYSVELGNRIVELERKIYQEAGSEFNINSPRQ
VGDLLFGTMKIPYRWAXTKQGQYSTDEAKLSELALEYAFVQDILEHRSLSKLKSTYVDAL
PKMIHHSTGKVHSSFNQALAATGRLSSNNPNLQNIPIRTREGREIRKAFIPSGQDNILLS
ADYSQIELRIIAELSKDKNMVEAFQLGHDIHTATASKVYGVAIEEVTPDQRRNAKTVNFS
IIYGAGSLNLSRQLGIKRTEAKEIIDQYFLQFNGLKSYMDRMVREAHEKGYVTTLMGRRR
YLRDINSRNAMARSAAERIAVNSPIQGTAADMIKVAMIGINESFKQAGLSSKMILQVHDE
LVFDVKKSELDTVRAIVIDKMKXAIPNLSVPIEVSTGTGANWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacaagaggatttttttcattgatggccatgcgatggtatacanngcccat
tacgcattcatcaacaggccactgatgaattccaaagggcaaaatgtctctgcaatcaat
ggattcataagagctatctgggatttgattgtcaaccaanaaccaacgcatctgggtgtt
gtatttgatccaaaaggcggcacattcagaagcgacttatatgaggagtacaaagctcaa
agagatgcccagccagaagatatatcatttgctattccatacatcataaagatccttgaa
ggaatgaatattccggtggaaattattccaaattatgaagcggatgatgtcatcggaaca
ttggccaaanaagcagaaaaacaaggatttgaggtctatatggtcacgccggacaaggat
tacgcgcaacttgtgtccgaaaatattttccaatataagccggcccgattcggtaatgac
atagaaatcctgggtgtagaggaggtgttanaaaaatgggaaatcaaacgtgttgaccag
gtaatagatatccttgggttgatgggagatagtgtagataatattccaggcctcccaggt
gttggtccgaagaccgcagtcaaattgatcgaagaatttgacaacctggagaacgtactg
gccaatgccgacaagatgaagggaaaacttcaggaaacagtgcaaaccaaggcagacctg
gctcgactatccaagacactggcaacaattcacattgacgcaccggtagatttcgactac
aaccactatgaagttaatgaatttaataatgatgtattgttagaggtctttaaggaactg
gagtttaaaaccctggcagccaccatattatcctataattctaaaaccgtaggaaagtca
acctcaacaaccaaagcagcttccacaaaaaaacaagattcagaagtatatcaagggtcc
ctttttgacaataaagatacagttgatgaaaaggaaacactatcggaagaattatccaat
gcccaatttaatattaccaatacaccacatgaatacaagttggtcgcaacagatgatgac
tggaacgcattaaggacggaaattaccggaaggaaattcttttgtttcgatacggaaacc
acaagtcttgatccaatagttgctgaattagtgggcatctcaatcagcactgaagctcat
aaggcatggtatatatcggtgcctgaagaccaacaagtcgctcaggttatagcaaatcaa
ctgaaaccgctgtgggaaaaccccgaaattgataaaatcggtcaaaatctcaaatacgat
atcagtgtcctgaaanaatacggaatcgacatcaaaggaagactattcgataccatgctt
attcactacctgatcgagccagaactaaggcacggcatggactatatggctgaagcatat
cttaaatacagaccgataccaattactgaattgatcggagaanaaagagaaagacaacta
tccatgcgggacgtggctttggaacaaataaaggagtatgcctctgaggatgccgatatt
accttccagttatataattatcttgtaccaggccttaaggaaattcaagcatacgatctg
tataacaacattgagggcaagctgataacggttttggccgatctggaaatggccggtgta
aacatcgatgcagaatatcttaaccattacagtgtggaattgggaaacaggattgtggaa
ctggaacgaaagatttaccaggaagcagggtcagaatttaacattaatagtccgcgacag
gtaggtgatctattgttcggcaccatgaaaattccttaccggtgggcanaaaccaaacaa
ggtcaatattcaacagatgaagccaaattatccgaattagcattagagtatgcatttgtg
caggatattctggagcaccgcagcttaagcaagctcaagtctacctatgtcgatgcactc
cctaagatgattcatcattcaacaggaaaggttcacagcagttttaatcaggcacttgct
gcaacaggaagattaagttccaacaatccgaacttgcagaacataccgatccgtactcgg
gaaggccgggaaatcagaaaggcgttcattccttccggccaggacaatatactcctttct
gcagattattctcaaatcgaacttcgcatcatagcagaactcagcaaggataaaaatatg
gtagaggcattccagcttggacacgatatacatactgctactgcttcaaaagtgtacggt
gtggccatagaagaggtaacacctgaccaaagacgtaatgccaagaccgtaaatttcagt
attatttatggtgccggctctttaaatcttagtcgtcaactgggtataaaacggacagaa
gccaaggaaattattgatcagtactttttgcaatttaatggacttaaaagctatatggac
cggatggtgcgcgaagctcatgaaaaaggctatgtaacaacattaatgggtagaaggcgc
tatttaagagatataaattcaagaaatgccatggccagaagtgccgccgaacgaatagcg
gtcaacagtccgattcaggggactgctgctgatatgataaaagtggcaatgatcggtatc
aatgaatcatttaaacaagccggattatcatcaaaaatgattcttcaggtacatgatgaa
ctggtatttgatgtcaaaaagagtgagttggacactgttcgtgcaattgttattgataaa
atgaaanatgcaattcctaatctatctgtgccaatagaagtcagtaccggaaccggagct
aattggctggaggctcactga
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