Candidatus Parvibacillus calidus: HWD63_06560
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Entry
HWD63_06560 CDS
T10915
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03440
Homologous recombination
Brite
Enzymes [BR:
pcau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HWD63_06560
DNA repair and recombination proteins [BR:
pcau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWD63_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
W02B3_4_N
Motif
Other DBs
NCBI-ProteinID:
QLH29069
UniProt:
A0A7D5MHM4
LinkDB
All DBs
Position
1487958..1491122
Genome browser
AA seq
1054 aa
AA seq
DB search
MGIHIPISNDITKLADALIEDIGLYRFDVLQPVYIVTQTKGMNSWLKYRMSEKHGVAANL
IFLTPEEIVYEVYKILGGSYKDKIDRKDMDWLIYAALSDEAFKEKFPERASYFYNEEGRD
KMKQWELAAKXGDLFDQYQIYRSEVIAQWKVNELESVEEKSRWQAYLWKKIDSIAGDKII
DFNAIKVDILEKLKTVQNQERLVRNIPVLHLFGLSIITKYHLEIIHAMSEHIDIRWYANN
PAPDYYWFEDEPQKVLDKWKAKNRRIEHITVGHPLLTDWGKVIQSIFRLISGHEEFINAI
TDLPLKQNNGTTLLASLQQSIQHNAVDRPDFDTGLFDDDTISITSNYSKRREVETLYNYI
LDAIATKRHGDILDREIIVMATDINAYAPYIRAVMDNAPFRFKYNIADEALANVNSPVAA
LISLLEFDGKLFGAEEVLGLLAHKYIREKFGINDLELIRNTIVKANARFGIENDYSTPMN
DTFIVSWRYALEKIFYGICLPGEIRIDXKHPFYTVETTDTVAGIQEISAFLAFFEAXKTH
VHEXKNPKPLREWRKFIEQVLEDMFAIPDDEKNEDYVXKIEKLIRFENLNDGLKDEEIPY
DVFSKRFLTGLKVETTSTRFMSRGITFCSPLPFRSLPFKLVCMLGLNHGEYPRLERRSDF
DLIASNRKLGDRNLKENDKHLFLESILSAEKALYLSYIGRSIKDNEILPPSILIDELLDY
LQMGNVEVDVXKKLVSGDPFYSFSTKYNKDSGNLLPNYFIQLAKEWPIPYNDNREVPEIK
EYDINTVWKFFEKNIQYYYNNVLGVYFEREDGDIKDTENFELDSLEEWTVKESLLDSRLK
GVEQALEEKLYLSGQLPLKNVGLGLVDEIDEVISPLVDDVKNDFPDNFDPKIVSIEITYD
DVRYFGEIKNVIDKKIISFHHGSSGGEAKRRARLAFQYLFAVVCNVDITGVILYTLNGKH
TLKQLGVDEARARLGNILTXFHENKERLIGYSAELYSQSLNENDSFEKIKNFFFIDRNYR
DDYYRHVMLNHEIDIDRVWDMHVILKEILLDNAY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacacatacctatttcaaatgatattaccaagttggctgatgctttgattgag
gacatcggcctgtacaggtttgatgtattacaaccggtctatatcgtcactcaaacgaaa
ggcatgaacagttggctcaagtacagaatgtcagaaaaacatggtgtggccgccaacctg
atatttttgacaccggaggaaatagtttacgaagtctataagattctgggcggcagctat
aaagataaaattgaccggaaggacatggattggttgatatatgctgccttgtctgacgaa
gcatttaaagaaaagttccctgaaagagcatcctacttttacaatgaagaaggtagagat
aagatgaaacaatgggaattagcggctaagatnggggatttgtttgatcagtatcagatc
taccgcagtgaagttattgcacaatggaaggtaaatgaattggaaagcgtggaagagaag
tcccgctggcaggcctatttatggaaaaagattgattcgattgccggtgataagatcatt
gattttaatgcaataaaagtagatatcctggaaaaactcaaaaccgtacaaaatcaggaa
cgtctggtcaggaatattccggttttgcatcttttcggtctttccatcattacaaaatac
catttggagatcatccatgcaatgagtgaacacatagatattcgttggtatgcgaataat
ccggcccccgattattattggtttgaagatgagccacaaaaggtattggataaatggaag
gcgaaaaacaggagaatagaacatattaccgttggacatcccttattgacagattggggt
aaggttattcaaagtatattcaggttgatatccggtcatgaggaatttatcaatgcgatt
accgacctgcctttaaaacaaaacaatggaaccactttattagcttctcttcaacaatcc
atccagcacaatgcggttgatcgacccgattttgacaccggattgtttgacgatgatacg
atctccattacttccaattattccaaaaggcgtgaagtcgagacattgtacaattatatt
ttggatgccatagctaccaaacggcatggtgatattctggatagggaaatcattgtcatg
gctaccgacatcaatgcatatgctccctatatccgcgctgttatggataatgcacctttt
agattcaaatacaatattgccgatgaggctttggctaatgtcaacagtcccgttgcagcc
ctgatttcgctgctggaatttgacggcaagctgtttggtgcagaggaagtccttgggtta
ttggcacataagtatatccgggaaaaattcggaataaatgatttggaattgatacggaat
accatcgtgaaggctaatgcgcgcttcggtattgaaaacgactactcaactccaatgaat
gatacctttatcgtttcctggcgttacgcattggagaagattttctatggcatttgtttg
cccggagagattagaatagataanaaacatccattctataccgtcgaaacaacggatact
gtggccggaattcaggaaatatcggcattcctggcgtttttcgaggctttnaaaactcat
gtacatgagagnaaaaatccaaagccattgagggagtggcgcaaattcatcgagcaggta
ttagaggatatgtttgcaattcctgacgatgaaaagaacgaagattatgtcaanaagatt
gaaaaactgatcagatttgaaaatctgaatgatgggttgaaagatgaagagattccgtat
gatgtattcagtaagcgtttcttgaccggattgaaagtagaaacaacatcgactcgtttt
atgagccgtggaatcactttttgttcccctttacctttcagaagtcttccatttaagctg
gtttgtatgttgggccttaatcatggagaatatccccgcttggagcggcgcagtgacttt
gacctgattgcatccaacaggaagcttggcgacaggaatcttaaggaaaacgataagcat
ctattccttgaatccatactttctgcggagaaagctttatatttgagttatatcggtcgg
tcgataaaagataatgagattctgcctccctctatcctcatcgatgaattgctggattat
ctgcagatggggaatgtggaggttgatgttagnaaaaaattggtttctggcgacccattt
tacagttttagtacaaaatataataaggattcgggcaatttgcttccgaattatttcatc
caacttgccaaggagtggccgattccatataatgacaacagagaagtgccggagattaag
gaatatgatatcaatacagtttggaaattttttgagaagaatattcaatattattacaac
aatgtgctgggggtgtattttgaaagggaagacggtgacattaaagataccgagaatttt
gaattggatagtctggaagaatggacggtgaaggaatcactccttgattcaagattgaaa
ggagtagagcaggcattagaggaaaaactctatttatccggacaattgccattgaaaaac
gtaggattaggactggtagatgagatagatgaagtgatcagtcctttggtcgacgatgtc
aaaaatgattttcctgataattttgatccgaaaattgtaagtattgaaataacttatgat
gatgtacggtattttggtgagataaagaatgtaattgataagaaaataataagttttcac
cacgggagttcaggtggagaggcaaagcgtcgtgccaggttggctttccagtatcttttt
gctgtagtatgcaatgtcgacattacaggtgtaattctatacaccctcaacggcaagcat
accttaaaacaactaggtgttgatgaggcgcgggcaaggttgggtaatatcttaacgttn
tttcatgaaaacaaagagaggctgataggatacagcgctgaactatattctcaatcgctt
aatgaaaatgattcatttgagaagattaaaaatttcttctttatcgatagaaattatcgt
gatgattattatagacatgtaatgctaaaccatgaaatcgatatcgaccgggtgtgggac
atgcatgtcatcctgaaagaaatattattggataatgcctattaa
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