Candidatus Parvibacillus calidus: HWD63_09980
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Entry
HWD63_09980 CDS
T10915
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau02024
Quorum sensing
pcau03060
Protein export
pcau03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HWD63_09980 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HWD63_09980 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HWD63_09980 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcau02044
]
HWD63_09980 (secD)
Secretion system [BR:
pcau02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HWD63_09980 (secD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Phyto_cutinase
Motif
Other DBs
NCBI-ProteinID:
QLH29678
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Position
2320127..2322685
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AA seq
852 aa
AA seq
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MKSNFSDTQILNILQEKAGQTVDLTFKRLKDRIDKFGVTQPNVSLDANRDMIVVELPGVD
NPERARKFLQASAKLEFFDVYRASDPGILEGFANADKTLKALKGGDSTQISTPTTKKDTI
WDKKTDSLGVVIDSTMRIVDVPVSNTMADAGPLFKIFTPNSATQQGIAFPLSVMGVADKN
KKKLIDEYLNMPQVKALFPADISFKWASKPTKDPETFKYTNKYELYGIKVPRSGKAPLEG
DRVVDARETQDQMSNQVAVSLRMDNEGAKKWGEMTTKAAADQNREIAIVLDGEVVSAPRV
NNAITSGDSQIIGDFSVQEGKDLANILQIGKLPAGTRIVQETLVGPSLGQENINKSIIAI
LIGLLFIIIFMISYFATAGAIAVITLLCNMFFIFGVLASKGTVLTLPGIAGILLTMGIAV
DVSVIIFEWVKEELKHGYGLKEAISRGFKHSYSAIIDANIITLITNIILAYFGLGPIKGF
AVVMIIGVLSSLFTAVLVGRMITDWWANKGKEIKFSTSFSDKXFHGANINWMGLRKFAYI
FSSSMVLIGLISIFTRGFELGVDMXGGYSANVSFVEGTKVDAETFRDYLKKELGGEPIVK
AVDVKNTYNITTSYKIDDPNPDVNEEVLSKIHKSVVEITXKDIPLDEFXKADAKGTHIAS
FSKVGPTVADDIKTSSFTAAILALAAIFIYILFRFNRWQFSLGAIIALVHDSLVVLGIFS
LLHGFVWFSMEIDQAFIAALLTVIGYSMNDTVIIFDRIREFAGTNLSSTKTEVINAAINS
TLGRTIITSLITFGVMIIMFIFGGDSIKGFTFAILIGIVFGTFSSIFIAGSIVHDLVADI
RPKTVAGKAATK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctaacttctctgatacccagatattgaatattctacaggaaaaagcaggacaa
actgtagacctgaccttcaaaagattgaaggaccgaatcgacaaattcggagttacccag
ccgaatgtgtcactggatgccaacagggatatgatagtagttgagttgccaggtgtcgac
aaccctgagcgggcaagaaaattccttcaagccagtgcaaagctggaattctttgatgtg
tatcgtgcttctgaccctggtatccttgaaggctttgccaacgctgacaaaacattgaaa
gctctgaaaggtggagattcaactcagatcagcacgcccacaacgaaaaaagataccatt
tgggacaaaaagacggatagcctaggtgtagtaattgattccaccatgaggattgttgat
gtgcctgtatctaatacaatggctgatgcaggtccactgttcaaaatatttactcccaac
tcagctacacagcagggaatcgcattccctctgtctgtaatgggtgttgccgataagaat
aaaaagaaattgatcgatgaatatctgaatatgccacaagtgaaggcattgttccctgca
gatatttccttcaagtgggcatccaagccgacgaaggatcctgaaaccttcaaatatacc
aacaagtacgagttgtatggtattaaggtgccacgttccggtaaagcgccattggaagga
gaccgggttgtagatgccagggaaacacaagatcaaatgtcaaatcaggtagctgtatct
ctccgaatggacaatgaaggtgccaagaaatggggtgagatgacgaccaaggcagctgcc
gaccaaaacagggaaatcgctatcgtccttgatggagaagtcgtctcagcaccaagggta
aataatgccatcacttcgggtgattcgcagattataggagactttagtgtacaggaaggt
aaagaccttgccaatatccttcaaataggtaagttacctgccggaacaaggattgtacag
gagaccctggtcggaccttcactgggtcaggaaaatatcaacaaatccataatcgccatc
ttgataggattattgtttatcatcatcttcatgatcagctattttgccacggcaggtgca
atcgcagtaataaccctactctgtaatatgttcttcatctttggggtacttgcctcgaaa
ggtaccgtacttaccttgccgggtattgctggtatcctgcttactatgggtattgctgtc
gatgtaagtgtaattatctttgaatgggttaaggaagagcttaaacatggatatggattg
aaagaggctatatcacgtggtttcaaacattcttattctgcaattatcgatgccaacatc
atcacattgattaccaacattatacttgcttattttggcttaggtccaataaaaggcttc
gcagtagtaatgatcatcggtgtattgtcttccttgttcactgctgttttggtaggtcga
atgattacagactggtgggctaataaaggtaaagaaatcaagttctctacttcattctct
gataaattntttcacggagccaatatcaattggatggggctgcgcaaatttgcttacatc
ttctcttcttctatggttctgattggattaatctccatcttcacacgagggttcgaactt
ggtgtagatatgaanggaggatactcagccaacgtttcctttgtggaaggcactaaggta
gatgctgaaacgtttagagattatctgaagaaggaattgggaggagaacctattgttaag
gctgtagacgtcaagaatacatacaacatcaccacatcctacaagatcgatgatcctaat
ccggatgtcaatgaagaggtattgtccaagatccataagtcagtggtagagataaccaan
aaagatattcctctggatgaattcaanaaagccgatgcgaaaggtacgcacattgcgagt
ttctcgaaagttggacctactgtagcggatgacattaaaacaagttcatttaccgccgct
attttagcccttgcagcgatattcatctatatcctgttccggttcaacagatggcagttt
agcttgggtgcaatcatcgccttggttcacgacagtttggtagtattgggtatcttttcc
ttactgcacggctttgtttggttttccatggaaatagatcaggcattcatagctgccttg
ttgacagtgattggttattcgatgaatgatacggtgatcatttttgacaggatcagggaa
ttcgcaggcacgaatctgagttcgaccaagactgaggtgataaatgcggctatcaacagt
acattaggccgtaccattattacatcattgattacctttggtgtgatgataatcatgttt
atctttggtggagacagtatcaaaggctttacatttgccattttaattggtattgtattc
ggtacgttctcaagtatattcattgccggctcgattgttcacgaccttgtcgcggatatc
aggccgaaaacagtggcgggcaaggctgccactaaataa
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