Candidatus Parvibacillus calidus: HWD63_14605
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Entry
HWD63_14605 CDS
T10915
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcau Candidatus Parvibacillus calidus
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcau03016
]
HWD63_14605 (truB)
Enzymes [BR:
pcau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HWD63_14605 (truB)
Transfer RNA biogenesis [BR:
pcau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HWD63_14605 (truB)
Prokaryotic type
HWD63_14605 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QLH30492
LinkDB
All DBs
Position
3440426..3441163
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AA seq
245 aa
AA seq
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MQKTTLDNLPRELVAYQEGVLLLIEKPLNWTSFDVVNRIRVALCKYFGIXKLKVGHAGTL
DPLATGLLIICIGKFTKRIDEIQAQEKRYSGIIRVGESTPTYDLESEIDKIHPIDHVTPI
MIEQVRKQFIGEIMQLPPIFSAIKKDGKRAYELARKGIDAGLEARPIVIHDLKFDDTSWP
DLXFEVTCSKGTYIRSLAHDVGVALDSGAHLKSLHRAGIGEYDNKDAIRLEDFLEVFGKR
KVAIQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgactctggacaacctgccacgtgaattagttgcttaccaggaaggtgtt
ttattactcatcgaaaaacccctcaattggacttcattcgatgtggtcaatcgcattcgt
gtggctttgtgtaaatacttcggcatcaanaaactgaaggttggccatgcaggcacactg
gatccccttgcaaccggcttactcattatatgtattggaaaattcaccaaacgaatcgat
gagattcaggcacaggaaaagcgatattcaggtatcatccgcgttggcgaatccactccc
acctatgacctggaaagtgaaatagacaagatccacccaatagatcatgtcacccctatc
atgatagaacaggtcagaaaacaatttatcggagagatcatgcagcttccaccgatcttc
agtgccatcaagaaagatggcaagcgggcttatgaactggcgagaaagggtatcgatgca
ggtctggaggccagacctattgtgatccatgatttgaaatttgatgatacatcatggccg
gatttattntttgaggttacctgctccaaagggacatatatccgatcgttggcccatgat
gtaggtgttgcgctggatagcggcgcncatctcaaatcattgcaccgcgccggaatcggt
gagtatgacaataaggatgcaatcagactggaggatttccttgaggtattcggaaaaaga
aaagtcgctattcaatag
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