Candidatus Parvibacillus calidus: HWD63_15070
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Entry
HWD63_15070 CDS
T10915
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pcau Candidatus Parvibacillus calidus
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcau02000
]
HWD63_15070
Transporters [BR:
pcau02000
]
Other transporters
Pores ion channels [TC:
1
]
HWD63_15070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
QLH30579
UniProt:
A0A7D5RKL3
LinkDB
All DBs
Position
complement(3556419..3559376)
Genome browser
AA seq
985 aa
AA seq
DB search
MKQCLITLFALLSFSFLQAQSVISGSVKDAXGVGIVGATVLVTGSNTGAATDIDGNFRID
NVSGTAVSLTVSSVGYTTQVVKVDFAGRNSASVQVVLVEDYKLLDEVVVVAYGTRXXEDL
TGSVTSVGEKDFQRGNIATPDQLLTGKVAGLQVTSGGGSAGGGSKLRIRGGASLNASNDP
LIVIDGIPVESNGIAGSGNFLNTINPDDIESISVLKDASATALYGSRASNGVVIVTTKKG
STGKLQWNFNTQLSVSQVAKKVDVYTGDQIRDIIKATGNQAYINLLGTANTDWQDEIYRS
AFGNDNNLSVGGSVANIPFRASVGFNNQDGVLKTNNFKRMSASLNINPSLFDDDLKLNIA
LKGTQTRNTWADEGAIGAAVSFDPTQPVHAGNKFGDYYEWLQNENTPHPLSTRNPLGLLX
LRDNTSKVNRFVGNLQADYRLPFLPDLHVLANVGMDRAFGQGDDIIKALSATNYQTGXRR
VHYEQGKTNSLLDLSLFYEKSFGKNSSVDILAGHSYQDFYTDVYNFPSYPEVGDVAIPGT
TPTFDSDRPEFRLESYLGRVNVNLANKYLLTASIRRDASSKFSKDNRVGYFPALAAAWKL
KDEFXSGSNTFSELKLRLGWGVTGQQDIGSYYSYLPVYNVSSSTAQYQFGNTFYPFLRPN
AYDANIRWETTTTSNVGLDFGFADSRITGSIDIYKKKTKDLLSVVPVAPGSNFDITLLTN
VGNMENKGVEVTLNTIPLKSEKMIWSLGFNVTYNETKITNLLRNQDPSFKGINVSGIGGG
TGNTIGKFEVGYAPYTFFVYKQVYDAKTGXPIEGLYEDLNRDGKVDDNDRYLYTKPAPDL
MLGLNTQVIIDKLTIGIAGHGAFNNYLYNNFASQGAALRRIEDPLNYISNGSRIYDDTRF
VNNQYLSDYFIENASFFRLDNINIGYNIGRIFRDKASLRLSANIQNVFVISKYRGLDPEI
ASDSGVDNNIYPRPRIFSIGASLDF
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatgtttaattacactgtttgctctgctgtccttctccttcctccaagcgcag
tccgttatttccggcagcgtaaaggacgcanaaggggttggcattgtcggggcaaccgtt
ttggtgacgggatccaacaccggcgcagcaactgatatcgatggcaatttcaggattgac
aacgtatccggcaccgctgtttccctcactgtttcttctgttggctataccacacaagtg
gtgaaggttgattttgccggccgaaattcagcatctgttcaagtggttctggttgaagac
tataagcttctcgatgaagtggttgttgtcgcctatggtaccaganaangagaagatctc
accggatcagttacttctgttggtgagaaggattttcagcgtggaaacatcgcgactccg
gatcagctactgaccggaaaggttgcgggacttcaggttaccagtggtggaggttctgcc
ggtggaggctccaagttgcgtatccgtggtggtgcatcactcaatgccagcaacgatcct
cttatcgttatcgatggtattccggttgaaagcaatggtattgcgggttcgggcaacttt
ctcaacaccattaatccggatgatatcgaatccatctctgtgctgaaagatgcctctgcg
actgcattatacggttcacgtgcttccaatggtgtagtgatcgtaactaccaaaaagggt
agtacaggaaagttacaatggaacttcaacacacaactttctgtctcacaagtcgccaag
aaagtggatgtctataccggtgatcagatacgcgatatcatcaaggctaccggtaatcaa
gcctacatcaacctgcttggtaccgcaaatactgactggcaggatgaaatctaccgttca
gcattcggcaatgacaataatctcagtgtgggcggatcagtagcaaatatccctttccgc
gcctcggtcggcttcaacaatcaggatggtgttttaaagaccaacaacttcaaaaggatg
tctgccagtctgaatatcaatccttcattatttgatgatgaccttaagttgaatattgca
ctgaaagggactcagacgcgcaacacatgggctgatgagggggcaattggtgctgctgtt
tcgtttgacccgactcaaccggtacatgccggcaataaatttggcgactattatgagtgg
ctacagaacgagaatacgcctcaccccctttccacacgtaatccgttgggccttctgngg
ctcagggataacacctctaaggtcaaccgatttgtcggaaatttgcaggcggactataga
ttaccattcttgccggatcttcatgttcttgccaatgtaggcatggacagggcattcggt
cagggagacgatattatcaaagctttgtcggcaaccaactatcagacagggngtcgaaga
gttcactatgagcagggcaagaccaattccttgctggacctgtcattattctatgaaaaa
tcctttggaaagaattcttccgtggatatcttggccggacacagttatcaggacttctat
accgatgtatacaacttcccatcctatcctgaagttggagacgtggccattcccggcacg
acacccacatttgatagtgatcgcccggaattcaggctggaatcttatttgggccgtgtc
aacgtgaatcttgccaacaagtatctgttgacagcttctattcgtcgtgacgcgtcttcc
aaattctcaaaagacaatcgcgttggctatttcccggcattggcagcagcctggaagctc
aaagatgagtttntcagcggctccaataccttttccgaacttaaactgagactcggatgg
ggtgtgacagggcagcaagacataggatcgtattattcctatctgccggtgtataatgtg
agtagttcaactgctcaatatcagtttggcaatacgttctatcctttccttcgccctaat
gcatacgatgccaatattcgatgggagaccacgacaacaagcaatgttggattggacttt
ggttttgcggacagcaggatcacaggtagcattgatatttacaagaaaaagaccaaggat
ctgctgagtgtggtaccggtagccccaggctctaattttgatattacgctcctcaccaat
gtgggcaatatggaaaacaaaggcgttgaagtcacactgaacaccattcctctgaagagt
gaaaaaatgatatggagcctcggtttcaatgttacatataacgaaacaaagattaccaac
ctgcttagaaatcaagatccatctttcaagggtatcaatgtttccggaatcggtggcggt
acaggaaatacaataggaaagtttgaagtggggtacgctccgtatactttcttcgtctat
aagcaggtatatgatgccaagaccggagnnccgatcgaaggcttgtacgaggatctgaat
cgagacgggaaggttgatgacaacgatcgttacctgtacactaagccggcgccggacctt
atgcttggtctgaacacgcaggtcatcattgacaaattgaccatcggaattgcaggacat
ggtgcattcaacaactatctgtacaacaactttgcttctcagggagcagcattgagaagg
attgaggacccgctgaactacatttccaacggatcacgtatctatgatgataccagattt
gtcaacaatcagtatttgtccgattattttattgaaaatgcctctttcttcagattagac
aatatcaatatcggatataacataggccgcatattcagagacaaggcatccttgagattg
tccgccaatattcagaatgtattcgtcatttccaagtaccggggccttgatcccgagatt
gcaagtgattcaggtgttgataacaatatttatccgcgtccgagaattttctcaattggg
gcaagcttagatttctaa
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