Candidatus Parvibacillus calidus: HWD63_15360
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Entry
HWD63_15360 CDS
T10915
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcau Candidatus Parvibacillus calidus
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcau02000
]
HWD63_15360
Transporters [BR:
pcau02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HWD63_15360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QLH30629
UniProt:
A0A7D5MK04
LinkDB
All DBs
Position
complement(3631271..3632767)
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AA seq
498 aa
AA seq
DB search
MKRQNSLIFVLGLLAVFSISCEKEFLDRKPIIGVTSNNFYKTEADALAAVNAAYATLQFE
LSPAGHFRWFWGDIMSDDSQKGGSGDNDVVDLMKLETFQGPTNTDLLESEWNADYEGIYR
ANVVLEKVPGIEMDEVLKKRILAEAKFIRAWFYYNLNTIFGGVPLADKVLAPSEYNRPKE
DAAVIWAFIEKDLKEAIEDLPQRSQYQAKDLGRITKGAARALLAKAYLYQGKYAEAGFQT
GEIIQSGEYSLVADYGTIFTKAGENNAESVFEIQYMNASXGNWGKNAANEGTFTNVFQRA
RGQFAGYGFNIPTQDFVDEFFKEGFEDPRLKYTVFRIGDQMGDRGEFTVANAGDVGYIYH
PRKYFTNQSEDAPFGDPNPNGESNDRVIRYADVLLMDAEAAAKTGDETKARESLNRVRMR
VGVPAITASSSALLDAIFRERRIELGLEGHRFFDLVRTGRAAEKLGPLGFKDGVHNIFPI
PNSEIVLSNGILKQNPGY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacaaaatagcttgatttttgtattagggctgttggccgtgttcagcatttct
tgtgaaaaggagttccttgatcgaaagcccatcatcggtgtcacatccaacaacttttac
aaaacagaggcggacgctttggcagcagtaaatgccgcctatgccacactacagtttgaa
ttaagtccggcaggacatttccgctggttttggggcgatattatgtcggatgattctcag
aaaggaggctccggggataatgatgttgtggatttgatgaaactagaaacatttcaggga
ccgaccaatacagatttacttgagtcggaatggaatgctgactacgaaggaatctaccgt
gccaatgttgtattggaaaaggtgccgggaatagaaatggacgaggtgttgaaaaagaga
atcctggcagaagccaaatttattcgagcctggttttattacaatctaaataccattttt
ggtggggttccactggcggacaaggtcctggcgccatcggaatacaacagaccgaaggaa
gatgccgctgtcatttgggcattcatagagaaagatctgaaagaggccattgaagacctg
cctcaaaggtcacaatatcaggcgaaagacttagggcggattacgaagggagcagcaagg
gccttgcttgccaaagcgtatctatatcaaggtaagtatgcagaggcagggtttcagaca
ggagagattatccaatccggagaatactcgttggtagcagattatggaacgatatttacc
aaggctggcgagaacaatgcagaatcggtctttgagattcaatatatgaacgcatcgngg
ggcaattggggtaaaaatgcggccaatgaaggtacctttaccaatgtattccagcgtgcc
agaggacaatttgccggctatggcttcaatattccgacacaggattttgttgatgaattc
ttcaaagagggttttgaggatccccgccttaaatatacggtgttcaggattggtgatcag
atgggagatcggggtgaatttacggttgccaatgccggagatgtaggttatatctatcat
ccaagaaaatacttcaccaatcaaagtgaagatgctccttttggcgatcccaatcccaat
ggcgagagtaatgaccgcgtcatcagatatgccgatgtcctgttgatggatgcagaagca
gctgctaaaaccggagatgaaaccaaggcgcgagagtcactgaaccgggtaagaatgcgg
gtaggtgtgccggctattacagcttcaagcagtgcattgctggatgctatttttcgggaa
agaagaattgagctgggcctggaagggcatcgtttctttgacctggtacgcaccggaaga
gcagctgaaaaattaggcccactgggctttaaggacggggtacacaatatattcccgata
ccgaatagcgaaatcgttttatccaacggtatattgaaacaaaatccgggttattga
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