Candidatus Parvibacillus calidus: HWD63_15615
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Entry
HWD63_15615 CDS
T10915
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWD63_15615 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcau03400
]
HWD63_15615 (ung)
Enzymes [BR:
pcau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HWD63_15615 (ung)
DNA repair and recombination proteins [BR:
pcau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HWD63_15615 (ung)
Prokaryotic type
HWD63_15615 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QLH30674
LinkDB
All DBs
Position
complement(3693943..3694617)
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AA seq
224 aa
AA seq
DB search
MHVKIQQDWYNLLEPEFQKPYFSRLTTSIKEXIAAGVTVYPPGKLIFNAFELTPPQQVKA
VILGQDPYHNPGEAMGLCFSVPRGVSVPPSLRNIFKELKTDLGVDPPNHGDLTTWARNGV
LLLNSILTVEKNSAGSHQKLGWQEFTDAVIRNISDYSKCVVFILWGAYARTKVPLIDADK
HLIITAAHPSPLARGAXFGHRPFSHTNNYLIENNITPIDWAISD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaaagatacaacaggactggtataatctgctagaaccggaatttcaaaagccg
tatttctcccgtctgacaacatccattaaggaanaaatagcagccggggtaaccgtatat
ccacccggcaaactgatattcaacgcatttgaattgacgccaccacaacaggtcaaagca
gtaatcctcggccaggatccttatcataatccgggtgaggcaatgggattgtgtttctcc
gttccgcgcggagtctctgtcccgccctccttgcgcaacatattcaaggagttaaaaaca
gacctcggtgtcgatcctcccaatcacggtgatcttaccacctgggccaggaatggagtg
ctgttgctcaacagtatcctgacagtggagaaaaacagtgccggatcacatcaaaaactc
ggctggcaggaatttaccgatgctgttatccgaaacatatctgactactcgaagtgtgtt
gtctttatactatggggagcctacgccagaactaaggtgccattaatcgatgctgacaag
catcttataataacagccgcacatccttctcctctggccaggggtgctnttttcggccat
cggcccttctcacataccaacaattatctcatagaaaataacatcacgccgatagattgg
gccatcagtgactaa
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