Pseudomonas cavernae: D3880_00015
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Entry
D3880_00015 CDS
T08208
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pcav
Pseudomonas cavernae
Pathway
pcav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3880_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcav03400
]
D3880_00015 (recF)
DNA repair and recombination proteins [BR:
pcav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D3880_00015 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
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Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_16
ABC_tran
AAA_13
NACHT
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AYC30865
UniProt:
A0A385YVD8
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All DBs
Position
2613..3713
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AA seq
366 aa
AA seq
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MSLSRVTVTAVRNLHAVTLSPSPRINILSGANGSGKTSLLEAIHLLGLARSFRSLRLLPV
IQYEQQACTVFGQVLLAEGGYSNLGVSRDRQGEFQIRIDGQNARSAAQLAETLPLQLINP
DSFRLLEGAPKVRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDAASQAAWD
RELCLASEEIDGYRRAYIQTLKPVFERTLNELVELEGLSLSYYRGWDRDRAIGDVLAASL
SRDQQLGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI
YLVDDLPSELDERHRRALCRLLEDLNCQVFITCVDEELMREGWRTDTPVAMFHVEQGRIT
PVGVKA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagtcgtgtcacggtcaccgcagtgcgtaatctgcacgcggtgactctctcc
ccctccccccgcatcaacatcctctcaggcgccaacggcagcggtaagaccagcttgctg
gaggcgatccatctgttgggcttggcgcgctcgttccgcagtctgcgcctgctcccggtc
atccagtatgaacagcaggcctgcacggtcttcggtcaagttttgctggcagagggtgga
tacagcaatctgggtgtttcgcgtgatcgacagggcgagtttcaaattcgcatcgacggg
cagaatgcacgcagcgcagcacagctggccgaaacgctgccgctgcagttgatcaacccc
gatagctttcgcttgctagaaggtgcgccgaaggtccgtcgtcagtttctcgactgggga
gtgttccacgtggaaccgcgctttcttccggcctggcagcgcctgcagaaggcgctgcgg
cagcgaaactcgtggctgcggcatggtacactggacgccgcttcgcaggcggcctgggac
cgcgaattgtgcctggccagcgaggaaatagacggctatcgacgtgcctatatccagacg
ctgaagccggtgttcgagcgcaccctgaatgaattggttgagctggaagggttgtccctc
agctattaccgcggttgggaccgggatcgtgcgatcggcgatgtgctggccgcctccctc
agccgcgatcagcagttagggcatactcaggccggtccacagcgcgcggatctgcgtctg
cgtttgggggcacacaatgccgcggacattctctcgcgcgggcagcagaagctggtcgtc
tgtgccttgcggattgcccaagggcatttggtcagtcaggccaggcgcgggcagtgcatt
tatctggtagacgacttgccgtccgaactggacgagcggcaccggcgcgcactgtgccgg
ttgttggaagatttgaactgtcaggtgttcatcacctgtgtcgatgaagaattgatgagg
gaaggctggcgcacggacacgccggttgccatgttccacgtggaacagggtcgaatcaca
ccagtgggagtgaaggcatga
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