Pseudomonas cavernae: D3880_00870
Help
Entry
D3880_00870 CDS
T08208
Name
(GenBank) IS256 family transposase
KO
K07493
putative transposase
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D3880_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transposase_mut
MULE
Clr5
FANCI_S1-cap
DDE_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AYC31024
UniProt:
A0A385YWV9
LinkDB
All DBs
Position
complement(187914..189140)
Genome browser
AA seq
408 aa
AA seq
DB search
MTQSKHPITDELLDQLLGNYQKPEDLIGAEGILKQLTKKLVERALDAELTHHLGHDKHQP
VTNPGGNARNGFSRKKLKGEFGELPIEVPRDRHGTFDPQIVEKHQTRWAGFDDKILSLYA
RGMTVREIQAHLQEMYGAEVSPSLISSVTDAVADEVKAWQSRPLDLVYPIVYLDCIHTKV
REGAVRVKAVYLALGINLAGEKEILGLWIAQNEGAKFWLQVVTELRNRGVQDIFVACVDG
LKGFPEAIEAVFPHTSVQLCIVHMVRHSLNYVSWKRRAEVAADLKRIYQCSTADEAELRL
GEFEAKWGDDYLPIGQSWRRNWARITPFFDFPPEIRKVIYTTNAIESVNMSLRKITKNRG
SFPSDEALLKLFYLALRNISKKWTMPIRDWKAALTRFTISYEDRLPQQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatcgaaacaccccatcaccgacgagctgctggatcagctcctgggcaactac
cagaaacctgaagacctgatcggtgccgagggcatcctcaagcagctgaccaagaagctg
gtcgagcgtgcgctggatgcagaactgacccatcacctcgggcacgacaaacatcagccg
gtgaccaatcctggcggaaatgcccgcaacggtttcagtcgcaagaagctcaagggcgag
ttcggtgagctacctatcgaggtgccgcgcgaccgccacggcactttcgatccgcagatc
gtcgagaagcatcagacccgttgggcgggcttcgacgacaagatcctctcgctgtatgcc
cgcggcatgaccgtgcgagagattcaggcccatttgcaggagatgtatggtgccgaggtg
tcgcccagcttgatttcctcggtaaccgatgccgtagccgatgaggtgaaggcctggcag
tcgcggccactcgatctggtctaccccatcgtctatctggactgcatccacaccaaggtg
cgcgaaggtgctgtgcgggtgaaagccgtctacctggcgctcggcatcaacctggccggt
gaaaaggaaatcctgggcctatggatcgcccagaacgagggcgccaagttctggttgcag
gtggtgaccgaactgcgcaaccgcggcgtgcaggacatcttcgtcgcttgcgtggatggc
ctgaagggcttccccgaagccatcgaggcagtattcccgcacaccagcgtgcagttgtgc
atcgtgcacatggtcaggcacagcctgaactacgtgtcctggaagcggcgcgccgaggtg
gccgctgatctgaagcggatttaccaatgcagcacggcggatgaagccgaactacgtctc
ggcgagttcgaggccaagtggggcgatgactatctgccgattggccaatcttggcggcgc
aactgggcgcggatcacgccgttcttcgacttcccgccggagatccgcaaggtcatctac
accaccaatgccattgaatcggtgaacatgagcctgcgtaagatcaccaagaaccggggc
tcgttccccagcgatgaagcactgttgaaactcttctacctggcgctacgtaacatcagc
aagaaatggacgatgccgatccgtgactggaaggcggcgctgacccgctttacgatcagc
tacgaagacaggctgccgcagcagtaa
DBGET
integrated database retrieval system