Pseudomonas cavernae: D3880_02380
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Entry
D3880_02380 CDS
T08208
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02020
Two-component system
pcav02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3880_02380
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
D3880_02380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcav02035
]
D3880_02380
Bacterial motility proteins [BR:
pcav02035
]
Flagellar system
Chemotaxis proteins
MCPs
D3880_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HBM
DUF948
PHO4
XkdW
Laminin_II
SHE3
TcdB_N
DUF4064
Motif
Other DBs
NCBI-ProteinID:
AYC31307
UniProt:
A0A385YZA6
LinkDB
All DBs
Position
complement(521769..523700)
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AA seq
643 aa
AA seq
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MFNRVLGNLSVGVKLSLGFGLVLLSTLGVALTAFHALHRLEARGETIRELGGVHALMLQA
RATEKEFGLTLATDAAKRVAALIDELVGLLQQHHAANADAASSSNAAKAYLAQFQQYAQA
LREEREARMRMQELAQTLGERFTDVLLDQLDALNTLAEQGQPIPSTRMMLLEQAAMLRDK
LANLRDSELYFAHEGSHRAHDDWETRMTELLTYLDSLSRQLEGAEQESLAQANQALNEYR
QAFERFASGRTRAADSQTAMNQASEQVSARLGAVMAAQEQTWQQMSQQVSRLLGVILLLS
LAFGIGAAVLIRHLILQPLRQALELTQRVTSGDLSAQIDAQGRRDELGQLIASVASMLDS
LRSLVGRIGQGVGQLNQAAHGVVQVADHTTQGVEKQNAETELAATAMQQMTATAQQVARN
AVDTCAAVDQANREAQRGDQLVRQASAQIDHLAVEMGGCSEAMALLMQESHAVGKVLDVI
NALAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLAHRTQSSTDEIATIVHQLRRLT
EQAAERLQGSQSLTRESVGLTAQTSQALQAITAAVSTVEQMSQQIAAAAEEQSTVAEQVG
RSMERVREIAEQSSQASGRLEGSVQELEQLGSTLNAAVAGFRT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgcgtactcggcaatctttcggttggggtaaaactctcgctcggcttcggc
ctggtgctgctctcgaccctgggcgtggcactcaccgccttccatgcgctgcaccggctg
gaggcgcgcggcgagaccatccgcgagctgggtggcgtgcacgcgctgatgctgcaggcg
cgtgccacggagaaggagttcggcctgacgctggccaccgacgcagccaagcgggtcgcc
gcgctgatcgacgaactggtcggcctgctccagcagcaccacgcggccaatgccgatgcg
gcgagttccagtaatgccgccaaggcttatctcgcccagttccagcagtatgcccaggcc
ctgcgggaggagcgcgaagcgcggatgcgcatgcaggaactggcgcaaacgcttggcgag
cgcttcaccgatgtattgctcgaccagctcgacgcgctcaataccctggccgagcagggc
cagcccataccgtcgacgcgcatgatgctgctcgagcaggccgcgatgctgcgcgacaag
ctggccaacctgcgcgacagcgaactgtacttcgcccacgagggcagccatcgcgcccac
gatgactgggaaacccgcatgaccgagctgctcacctacctggacagcctgtcacgccag
ctggaaggtgccgaacaggaatcgctggcccaggcgaaccaggcgctgaacgagtatcgc
caggcattcgagcgcttcgcctcgggcagaacccgcgcggccgacagccagacggcgatg
aaccaggcctccgagcaggtcagcgcgcggctcggcgcagtgatggcggcccaggagcag
acctggcagcaaatgagccagcaggtctcgcgcctgctcggcgtgatcctgctgctgtcg
ctcgccttcggcatcggcgccgccgtgctgatccgccacctgatcctgcagccgctgcgc
caggccctggaactgacccagcgcgtcacctccggcgacctcagcgcgcagatcgatgcc
cagggacgccgcgatgaactgggtcagctgatcgccagtgtggccagcatgctcgacagc
ctgcgcagcctggtcgggcgcatcggccagggcgtcggccagttgaaccaggccgcccac
ggcgtggtgcaggttgccgaccacaccacccagggcgtggaaaagcagaacgcggaaacc
gaactggcggcgaccgccatgcagcagatgaccgccaccgcgcagcaggtcgcacgcaac
gccgtcgacacctgcgcagcggtcgatcaggccaaccgcgaggcgcagcgcggcgatcaa
ctggtgcgccaggccagtgcccagatcgatcacctggccgtggagatgggcggttgctcc
gaggccatggcgctgctgatgcaggagagccatgcggtcggcaaggtgctcgacgtgatc
aacgccctggccgagcagaccaacctgctggcgctcaatgccgccatcgaggccgcccgc
gccggcgagcatggccgcggcttcgcggtggtggccgacgaggtgcgcagcctggcccat
cgtacgcagagctccaccgatgagatcgccaccatagtccaccagttgcgccgcctcacc
gagcaggccgccgaacgcctacagggcagccagtcgctgacccgcgagagcgtggggctg
acggcccagacctcgcaggcgctgcaggccatcaccgcggcagtgtcgaccgtcgagcag
atgagccagcagatcgctgccgccgccgaggagcagagcacggtggccgaacaggtcggc
cgcagcatggagcgggtacgcgagatcgccgagcagagcagccaggccagcggtcgactg
gaaggttcggtacaggaactggaacagctcggcagcacgctgaatgccgcggtggcgggc
ttccgcacctga
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