KEGG   Pseudomonas cavernae: D3880_03025
Entry
D3880_03025       CDS       T08208                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pcav  Pseudomonas cavernae
Pathway
pcav00740  Riboflavin metabolism
pcav01100  Metabolic pathways
pcav01110  Biosynthesis of secondary metabolites
pcav01240  Biosynthesis of cofactors
pcav02024  Quorum sensing
Module
pcav_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    D3880_03025 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D3880_03025 (ribD)
Enzymes [BR:pcav01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     D3880_03025 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     D3880_03025 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AYC31423
UniProt: A0A385Z0N8
LinkDB
Position
645712..646842
AA seq 376 aa
MSDGAQDRLDAHCMSRALELARQGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEV
HALRQAGERARGATAYVTLEPCSHHGLTPPCAEALVQAGVARVVAAMQDPNPQVAGRGLL
RLAAAGIAVHSGVLEGEARALNPGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITG
PAARAAVQRLRARSSVVLSGADTVLADAARLTVRAEELGLNAEQTALAMSRAPLRVLVDG
RLRVPLEAPFYQAGAALVAACTAAGRERFRAAGHELLALPGSSGQVDLHRLLVELAARGA
NEVLVEAGPRLAGAFAALGLVDEYQLFVAAKFLGSSARPLLELPLTRMAEAPALKIVEMR
AVGDDWRIIAVPTAAS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgagtgatggcgcgcaggaccggctcgacgcgcactgcatgagccgcgccctcgaattg
gcgcgccagggcctgtattccacccatcccaatccgcgcgtcggttgcgtcatcgttcgc
gacgggcagatcgtcggcgaaggctggcatgtccgtgccggcgaaccgcacgccgaagtc
catgccctgcgccaggccggcgaacgggcgcggggcgccaccgcctacgtgaccctcgag
ccctgcagccaccacggcctcaccccgccgtgcgccgaagcgctggtgcaggccggcgtg
gcgcgggtggtggcggccatgcaggaccccaacccgcaagtcgccgggcgcggcctgttg
cgcctggccgcggccggcattgcggtgcatagcggcgtgctggagggcgaggcgcgggcg
ctgaaccccggcttcatcaaacgcatggagcagggcctgccgttcgtgcgggtcaagctg
gcgatgagcctggacgggcgcacggcgatggccagcggcgagagccagtggatcaccggc
ccagcggcgcgcgccgcggtgcagcgcctgcgtgcgcgctccagcgtggtgctgagcggc
gccgacaccgtgctggccgatgctgcgcggctcacggtgcgcgccgaggagctgggtctg
aatgccgaacagaccgccctggccatgagccgtgcgccgctgcgcgtgctggtcgacggc
cgtctgcgggtgccgctggaggcgccgttctatcaggccggcgcggccctggtggcggcc
tgcacggcggcggggcgcgaacgcttccgcgccgccggccatgaattgctggcgctgccg
ggcagcagcgggcaggtcgacctgcaccggctgctcgtcgagctggccgcgcgcggcgcc
aacgaggtgctggtcgaggccgggccgcggctggccggcgcgttcgccgcgctcggcctg
gtcgacgagtatcagctgttcgtcgccgccaagttcctcggctccagcgcgcggccgctg
ctcgagctgccgctgacacggatggccgaagcgccggcactgaaaatcgtcgagatgcgt
gcggtcggcgatgactggcggatcatcgccgtgcccacggccgcgtcgtag

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