KEGG   Pseudomonas cavernae: D3880_04380
Entry
D3880_04380       CDS       T08208                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pcav  Pseudomonas cavernae
Pathway
pcav02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D3880_04380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcav02022]
    D3880_04380
Two-component system [BR:pcav02022]
 NtrC family
  HydH-HydG (metal tolerance)
   D3880_04380
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_5 AAA_2 AAA_16 Mg_chelatase AAA HTH_8 HTH_11 HTH_23 HTH_AsnC-type nSTAND3 AAA_22
Other DBs
NCBI-ProteinID: AYC31673
UniProt: A0A385Z1E7
LinkDB
Position
complement(952283..953719)
AA seq 478 aa
MPHILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERFSITGFDLIVSDLRLPGAPG
TELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRERQESL
SVPANERGNAAPSASRGNGKTPESSQGEIGIIGSCPPMLELYSKIRKVAPTDSTVLIQGE
SGTGKELVARALHNLSRRAKAPLISVNCAAIPETLIESELFGHEKGAFTGASAGRTGLVE
AADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAK
VGQFREDLYYRLHVIALKLPPLRERGSDVNEIAKLFLARQATQMGRGEMRFAHDAEQAIR
HYSWPGNVRELENAIERAVILCESAEISAELLGIDIELDDLEDEDFSLPAPSHTGSNANE
PTEDLSLEDYFQHFVLEHQDHMTETELARKLGISRKCLWERRQRLGIPRRKTGTAVDN
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgccacatattctgatcgtcgaagacgaaaccatcatccgctcggcgctgcgccgcctg
ttggagcgcaaccagtacgaagtcagcgaagccggctcggtacaggaagcccaggagcgc
ttcagcattaccggtttcgacctgatcgtcagcgacctgcgcctgcccggcgctcccggt
accgaactgatcaagctcggccagggcacgccggtgctgatcatgaccagctacgccagc
ctgcgttcggcggtggactcgatgaagatgggcgccgtcgactacatcgccaaacccttc
gaccacgacgaaatgctccaggccgtggcgcgcatcttgcgcgaacgtcaggaaagcctg
agcgtaccggcgaacgagcgcggcaacgccgccccttccgccagccgcggcaacggcaag
acaccagaaagcagccagggtgagatcggcatcatcggttcctgcccacccatgctagag
ctgtacagcaagatccgcaaagtcgcccccaccgactcaaccgtgctaattcagggcgag
tccggcaccggcaaggagctagtcgcgcgcgcgctgcacaacctgtcccggcgtgccaag
gcaccgctgatctcggtgaactgcgcggcgatcccggaaaccctgatcgagtccgaactg
ttcggccatgagaagggtgccttcaccggcgccagcgccggccgcaccggtctggtagaa
gccgccgacggtggcaccctgttcctcgacgagatcggcgaactgccgctggaagcccag
gcccgcctgttgcgcgtcctgcaggaaggcgagatccgcagagtcggctcggtgcagtcg
cagaaagtcgacgtgcgcctgatcgccgccacccaccgcgatctcaagagcctcgccaag
gtcggccagttccgcgaagacctgtattaccgcctgcacgtgatcgccctgaaactgccg
ccgctgcgcgagcgcggcagtgacgtcaacgaaatcgccaagctgttcctggcccgtcag
gccacgcagatgggccgcggcgagatgcgcttcgcccatgacgccgaacaggccatccgc
cactattcgtggccgggtaacgtgcgcgagctggagaacgccatcgagcgcgcggtgatc
ctttgcgagagcgcggagatttccgccgagctgctgggcatcgatatcgaactggacgac
ttggaagacgaggacttcagcctcccggcgcccagccacaccggcagcaacgccaacgaa
cccaccgaggacctgtcgctggaggactacttccagcatttcgttctcgagcaccaagat
cacatgaccgagaccgaactggcacgcaagctggggatcagccgcaagtgcctgtgggaa
cgccgccaacgcctgggcatcccgcggcgcaagaccggcaccgccgtcgacaactga

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