Pseudomonas cavernae: D3880_04470
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Entry
D3880_04470 CDS
T08208
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00550
Peptidoglycan biosynthesis
pcav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3880_04470 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcav01003
]
D3880_04470 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
D3880_04470 (mrcB)
Enzymes [BR:
pcav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
D3880_04470 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D3880_04470 (mrcB)
Glycosyltransferases [BR:
pcav01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
D3880_04470 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
D3880_04470 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
AYC31691
UniProt:
A0A385YZ40
LinkDB
All DBs
Position
972100..974427
Genome browser
AA seq
775 aa
AA seq
DB search
MTRSRSSRSPRSRAKRSSSGMRPWLGWALKLGLVGLVLLAGFAVYLDAVVQEKFSGKRWT
IPAKVYARPLELFVGQKLTKGDFLTELDALGYRRESSASGPGATVVAGNNVELHTRGFQF
YEGAESAQRVRVRFSGDYVAALSQGNDAELAVARLEPLLIGGLYPAHNEDRILIKLDQVP
PYLVDTLVAVEDREFFNHHGVSPKSIARAMWVNASSGHLRQGGSTLTQQLVKNFYLTSER
SLVRKATEAMMAVLLELHYDKQEILEAYLNEVFLGQDGQRAVHGFGLASQYFFSRPLAEL
KLHQVAMLVAMVKGPTYYNPRRNPERALVRRNLVLDLLAEQGVVTAEEADAAKKLPLGVT
ARGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQLKAEGALGATLKGL
SGRKGVDQVEAAMVVTNPETGEVQAMIGSRQPRFAGFNRALDAVRPIGSLIKPAVYLTAL
ERPSQYTLTSWLADEPFSVKGQDGQVWRPQNYDHKAHGTIYLYQGLANSYNLSTAKLGLE
VGVPNVLKTLARLGVSREWPAYPSMLLGAGSLSPVEVATMYQTLANGGFNTPLRGIRSVL
TADGQPLKRYPFQVQQRFDPGAIYLVQNAMQRVMREGTGRSVYSQLSSSLNLAGKTGTSN
DSRDSWFAGFSQDLLAVVWLGRDDNGPTPLTGATGALQVWTGFMRRADPLPLNMPLPDNV
VQAWIDAGTGQGSAAGCPNAVQMPYIRGSEPTPGPACGLEAPVDAVMDWVRGWMN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctcccgatcttcccgctccccccgttcgcgcgctaagcgctcctcttccggc
atgcgcccctggctgggttgggccctcaagctcggcctggttggcctggtgctgctggcc
ggtttcgccgtttacctggatgccgtggtgcaggagaagttctccggcaagcgctggacc
atcccggccaaggtctacgcccgcccgctcgagctgttcgtcggccagaagctgaccaag
ggcgacttcctcaccgaactggatgccctcggctatcgccgcgagtcgtcggccagtggc
cccggcgcgacggtggtggcgggcaataatgtcgaactgcatacccgtggcttccagttc
tacgagggcgccgagtcggcgcagcgggtgcgcgtgcgcttctccggcgattatgtcgcc
gccctcagtcagggcaatgacgccgaactggccgtcgctcgcctggagccgttgctgatc
ggcggcctgtatccggcccacaacgaggaccgcatcctcatcaagctggatcaggtgccg
ccttatctggtcgacaccctggtggcggtggaggatcgcgagttcttcaatcaccacggg
gtttcgccgaagtccatcgcccgcgccatgtgggtcaacgccagcagcgggcatctgcgc
cagggcggtagcaccctgacccagcagttggtgaagaacttctacctgaccagcgaacgc
agcctcgtgcgcaaggcgaccgaggccatgatggcggttttgctggagctgcattacgac
aagcaggaaatactcgaggcctacctcaacgaggtgtttctcggtcaggacggtcagcgt
gcggtgcatggcttcggcctggccagccagtacttcttcagtcggccgttggccgagctg
aagttgcatcaggtggcgatgctggtcgccatggtcaaggggccgacctactacaacccg
cggcgcaatcccgaacgcgccttggtgcgccgcaacctggtgctcgatctgctggccgaa
cagggcgtggtgacagccgaggaggcggatgcggcgaaaaaactgccgctgggcgtgact
gcgcgcggcagcatggccgacagctcctatccggcgtttctcgacctggtcaagcgtcaa
ctgcgccaggactaccgtgacgaggacttgaccgaagaaggcctgcgcatcttcaccagc
ttcgacccgattctacagctcaaggccgagggtgccctgggcgcgaccctgaagggcttg
agcgggcgcaagggcgtcgaccaggtggaagcggcgatggtcgtgaccaatcccgaaacc
ggcgaagtacaggcgatgatcggcagtcgccagccgcgcttcgccggcttcaaccgggcg
ctggacgcggtgcggccgattggctcgctgatcaaaccggcggtttacctgacggcgctg
gagcgacccagtcagtacactctgaccagttggctggccgacgagccgttctcggtcaag
ggccaggatggtcaagtctggcggccgcagaattacgaccacaaggcgcacggcactatt
tatctgtatcagggcctggccaactcctacaacctgtccaccgccaagctgggcctggaa
gtcggcgtgccgaacgtgctcaagaccctcgcccgcctcggtgtgtcgcgcgagtggccg
gcttacccatcgatgctgctgggtgccggctcgctcagcccggtggaagtggcgaccatg
taccagaccctcgccaatggcggcttcaataccccgctgcggggcattcgcagcgtgctg
acggccgacgggcagccgctcaagcgctatcccttccaggtccagcagcgcttcgatccc
ggcgccatttacctggtgcagaatgccatgcagcgggtcatgcgcgagggcaccgggcgt
tcggtgtacagccagttgtccagctcgctgaatctggccggcaagaccgggaccagcaac
gactcgcgcgacagctggttcgccggcttcagtcaggatttgctcgcggtggtctggctg
ggccgtgacgacaacggcccgacgccgctgaccggtgccaccggtgcgctgcaggtgtgg
accggcttcatgcgtcgcgccgatccgttgccgctgaacatgccgttgccggacaacgtg
gtgcaggcctggatcgacgccggcaccggtcagggttcggctgccggctgcccgaatgcg
gtgcagatgccgtatattcgtggtagtgaaccgacgcctggtccggcttgcggactcgag
gcgccggtggacgcggtgatggactgggtgcgcgggtggatgaattga
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