KEGG   Pseudomonas cavernae: D3880_05810
Entry
D3880_05810       CDS       T08208                                 
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
pcav  Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcav03400]
    D3880_05810 (sbcD)
DNA repair and recombination proteins [BR:pcav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D3880_05810 (sbcD)
    Archaeal homologous recombinant proteins
     D3880_05810 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2
Other DBs
NCBI-ProteinID: AYC31925
UniProt: A0A385YYG6
LinkDB
Position
1262118..1263338
AA seq 406 aa
MRLLHTSDWHLGQHFMGKTRQAEHQAFLAWLLAQVREQQVDAVLVAGDIFDTGAPPSYAR
ELYNHFVVELHAIGAELVVLGGNHDSVAMLGESKTLLAQLNTRVIPGVCAELVEQLLVLH
RRDGTPGAVLCGIPFIRPRDVLQSQAGQSAQDKQQSLQQAIQQHYQRLYQLAEAKRDELG
GQLPIIATGHLTTVGASASESVREIYVGALEAFPTNAFPPAAYIALGHIHRPQKVGGLEH
IRYCGSPIPLSFDEARQGKEVLLVELDGTGLRAVTALPVPRFQPLLSVRGSLVELAAQIA
EAAQQGSAELPVWLEVLVSSDDYLSDLQARLAKLSEGLPLEVLRIRRERGAAQASLSGQA
KETLDELSPDEVFVQRLSSEELDPELQSDLRGLYRQVVSALREDQA
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcgcctgctgcatacctccgactggcacctcggccagcacttcatgggcaagacccgc
caggccgagcaccaggccttcctcgcctggctgctcgcccaggtccgtgagcagcaagtg
gatgccgtgctggtcgccggcgatatcttcgataccggtgcgccgcccagttatgcccgc
gagctgtacaaccatttcgtcgttgaactgcacgccatcggcgccgaactggtggtgctg
ggcggcaaccatgactcggtggccatgctcggtgagagcaagaccctgctggcgcagctc
aacacccgggtgatccccggcgtctgcgccgagctggtcgagcagctgctggtcctgcat
cgccgtgacggtacgccgggcgcggtgctctgcggcattcccttcatccgcccgcgtgac
gtactgcagagccaggccgggcagagcgcgcaggacaagcagcagtccctgcagcaggcg
atccagcagcactaccagcgcctctatcaactggccgaggccaagcgcgacgagctcggc
ggccagttgccgatcatcgccacgggccatctgaccaccgtcggcgccagcgccagcgag
tcggtgcgcgagatctatgtcggcgcgctggaagccttccccaccaatgccttcccgccg
gcggcctatatcgcccttggccatatccaccggccgcagaaggtcggcggcctggagcac
atccgctactgcggttcgccgattccgctgagtttcgacgaagccaggcagggcaaggag
gtgctgctggtcgagctggacggtaccggcctgcgcgcggtgacggcgctgccggtgccg
cgcttccagcccttgttgtccgtgcgcggctcgttggtcgaactggcggcgcagatcgcc
gaggcggcccagcagggcagtgccgagctgccggtctggctggaagtgctggtcagcagc
gacgactacctcagcgatctgcaggcgcggctggccaagctgagcgagggcctgccgctg
gaagtgctgcgcatccgccgggagcgcggtgcggcccaggccagcctgagcggccaggcc
aaggagacgctcgacgagctgagcccggacgaggtgtttgtccagcggctgagcagcgag
gagttggacccagagttgcagagcgatctgcgcggtctctatcgccaggtggtcagcgcc
ctgcgggaggatcaggcatga

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