Pseudomonas cavernae: D3880_05825
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Entry
D3880_05825 CDS
T08208
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcav03009
]
D3880_05825 (rlmF)
Enzymes [BR:
pcav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
D3880_05825 (rlmF)
Ribosome biogenesis [BR:
pcav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3880_05825 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AYC35029
UniProt:
A0A385Z6V4
LinkDB
All DBs
Position
complement(1267353..1268336)
Genome browser
AA seq
327 aa
AA seq
DB search
MRNQPPRPVPPRATEKKAVLHPRNRHQGRYDFPKLIKGSPELAAFVILNPYGKQSIDFAN
PEAVKVFNRALLEQFYGIRHWDIPAGYLCPPIPGRADYLHYLADLLGTSHDGVIPRGPGI
HALDIGVGANCIYPLIGQHDYGWRFVGADIDPLALASAAAILLANPALGAIELRRQTEPE
HIFQGLIGSDERFDVTLCNPPFHASLDEASRGSQRKWKNLGKLDPSRKLPQLNFGGQGAE
LHCTGGEAAFIARMAAESVAFAEQVFWFSTLVSKASNLPAMREALQALGASDIRVVEMAQ
GQKQSRFIAWTFLDKNQRRAWRKQRWN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaccaaccaccccgcccagttccgccgcgcgcgaccgagaagaaggccgtcctg
catccgcgcaaccgccaccagggccgctacgacttccccaagctgatcaagggcagcccg
gagctggcggcgttcgtgatcctcaatccgtacggcaagcagagcatcgacttcgccaac
ccggaggcggtcaaggtgttcaaccgcgcgctgctcgagcagttctatggcatccgccac
tgggacatccccgccggctacctgtgcccgccgattcccgggcgcgccgattacctgcac
tacctcgccgacctgctcggcaccagccatgacggcgtgatcccgcgcgggccgggcatc
catgcgctggatatcggcgtcggcgccaactgcatctatccgctgatcggccagcacgac
tatggctggcgcttcgtcggcgcggacatcgacccgctcgcgctggcctcggcggccgcc
atcctgctagccaacccggcgctcggagccatcgaactgcgccgccagaccgagcccgaa
cacatcttccagggcctgatcggcagcgatgagcgcttcgacgtcaccctctgcaacccg
ccgttccacgcctccttggacgaagcctcgcgcggcagccagcgcaagtggaagaacctc
ggcaaactcgacccgagccgcaagctgccgcagctgaacttcggcggccagggcgccgaa
ctgcattgcacgggcggggaagccgcgttcatcgcacgcatggccgcggaaagcgtcgcc
ttcgccgagcaggtgttctggttcagcaccctggtgtccaaggccagcaacctgccggcc
atgcgcgaagccctgcaggccctgggcgccagcgatatccgcgtggtcgaaatggcccaa
gggcagaaacagagccgtttcattgcctggaccttcctcgacaagaaccagcgccgcgcc
tggcgcaagcagcgctggaactga
DBGET
integrated database retrieval system
