Pseudomonas cavernae: D3880_05845
Help
Entry
D3880_05845 CDS
T08208
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3880_05845
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcav01007
]
D3880_05845
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcav03016
]
D3880_05845
Enzymes [BR:
pcav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
D3880_05845
Amino acid related enzymes [BR:
pcav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
D3880_05845
Transfer RNA biogenesis [BR:
pcav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D3880_05845
Prokaryotic type
D3880_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AYC31930
UniProt:
A0A385Z038
LinkDB
All DBs
Position
complement(1269870..1272701)
Genome browser
AA seq
943 aa
AA seq
DB search
MDKTYQPHAIETSWYQTWESNNYFAPQGAGEPYTIALPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMVVERQLGAQNLSRHDLGRDKFLDKVWEWKEESGG
NITRQIRRLGSSVDWSRERFTMDDGLSDAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGHLWNLRYPLADGHKTADGKDHLVVATTRPETMLGDAAVAVHPTDERYK
ALIGTFVELPLVGRRIPIIADEYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NAAVLPVAQVFNLDGSVNDEVDASLPGEYAYLDRFEARKKIVAAFEAAGLLEKIDDHALK
VPRGDRSGTVIEPWLTDQWYVSTKPLAEQAIAAVEDGRIQFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDEAGNVYVGRDEAEVRAKHNLGDSKLRQDDDVLDTWFSSGLWTF
STLGWPQQTDFLKTFHPTDVLVTGFDIIFFWVARMIMLSLHLTQQIPFKTVYVHGLVRDG
QGQKMSKSKGNVLDPLDIVDGISLDTLLEKRTSGMMQPKLAEKIAKQTKAEFPEGIASYG
TDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKLWNAANFVIENTDGQDTGVNDEPVEL
SSVDRWIISQLQRSEAEVTRQLEQFRFDLAAQALYEFVWDEYCAWYLELVKPVLWDENAP
IERQRGTRRTLIRVLEVALRLAHPFMPFITEEIWQRIKAQAGKQGPTLMLQPWPVANEAR
IDDAAEGDIEWVKALMLGVRQIRGEMKISMAKRIDIILNNASPEDHRRLADNEPLLMKLA
KLESVRVLDQGEEAPMSATALVGEMQVLVPMAGLIDKGAELARLDKEIQRLDGEVQRVGG
KLANQGFVAKAPAEVLDKERAKLAEAEQALAKLIEQREKIASL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacctaccagccgcacgccatcgaaacttcctggtaccagacctgggagtcc
aacaactatttcgccccgcaaggtgcgggcgagccctacaccatcgccctgccgccgccg
aacgtcaccggcagcctgcacatgggccacggcttcaacaacgcgatcatggatgcgctg
atccgcttccgccgcatgcagggccgcaacaccctgtggcagccaggcaccgaccatgcc
gggatcgccacccagatggtggtggagcgccaactgggcgcgcagaacctgtcgcgccat
gacctcggccgcgacaagttcctggacaaggtctgggaatggaaggaagagtcgggcggc
aacatcacccggcagatccgccgcctcggctcctcggtggactggtcgcgcgagcgcttc
accatggacgacggcctctccgatgcggtcaaggaagccttcgtgcgcctgcacgaggac
ggcctgatctaccgcggcaagcgcctggtcaactgggacaccaagctgcacacggcgatc
tccgacctcgaagtggaaaaccacgacgagaagggccacctgtggaatctgcgctatccg
ctggccgacggccacaagaccgccgacggcaaggaccatctggtcgtcgccaccacccgc
ccggaaaccatgctcggcgacgccgccgtcgccgtgcacccaaccgacgagcgctataag
gcgctgatcggcaccttcgtcgagctaccgctggtgggccggcgcatcccgatcatcgcc
gacgagtattgcgatcccgagttcggcaccggctgcgtgaagatcaccccggcccacgac
ttcaacgactacgaagtcggcaagcgccacaacctgccgctgctcaacatcttcgacaag
aacgccgcggtgctgccggtcgcccaggtgttcaacctcgacggcagcgtcaacgacgag
gtcgacgccagcctgccgggcgaatacgcctacctcgaccgcttcgaggcgcgcaagaag
atcgtcgccgccttcgaggccgccggcctgctggagaagatcgacgatcacgcgctgaaa
gtgccgcgcggcgaccgctccggcaccgtcatcgagccgtggctgaccgaccagtggtac
gtctccaccaagccgctggccgagcaggccatcgccgccgtggaagacggccgtatccag
ttcgtgcccaagcagtacgagaacatgtacttcagctggatgcgcgacatccaggactgg
tgcatcagccgtcagctgtggtggggccaccgcatcccggcctggtacgacgaagccggc
aacgtctatgtcggccgcgacgaggcggaagtgcgtgccaagcacaacctcggcgacagc
aaactgcgccaggacgatgacgtgctggacacctggttcagctccggcctgtggaccttc
tccaccctcggctggccgcagcagaccgattttctcaagaccttccaccccacggatgtc
ttggtgacgggcttcgatatcatcttcttctgggtcgcccggatgatcatgctgtccctg
cacctgacccagcagatcccgttcaagaccgtctacgtccacggtctggtgcgcgacggc
cagggccagaagatgtccaagtccaagggcaacgtcctcgacccgctggacatcgtcgac
ggcatcagcctcgacaccctgctggaaaaacgcaccagcggcatgatgcagcccaagctg
gcggagaagatcgccaagcagaccaaggcggagttccccgaaggcattgccagctatggc
accgacgccctgcgcttcaccttctgctcgctggcctccaccggccgcgacatcaagttc
gacatgggccgcgtcgagggttaccgcaacttctgcaacaagctgtggaacgccgccaac
ttcgtcatcgagaacaccgatggccaggacaccggcgtcaacgacgaaccggtcgagctg
tcctcggtggaccgctggatcatctcgcagctgcagcgcagcgaagccgaagtcacccgc
cagctcgagcagttccgtttcgacctggccgcgcaggcgctgtatgaattcgtctgggac
gagtactgcgcctggtacctggagctggtcaagccggtgctgtgggacgagaacgccccg
atcgagcgtcagcgcggcacccgccgcaccctgatccgcgtgctggaagtggcgctgcgt
ctggcccacccgttcatgccgttcatcaccgaagaaatctggcagcgcatcaaggcccag
gccggcaagcaaggcccgaccctgatgctgcaaccctggccggtggccaacgaggcgcgc
atcgacgacgccgccgaaggcgacatcgagtgggtcaaggcgctgatgctcggcgtgcgg
cagatccgtggcgagatgaagatctccatggccaagcgcatcgacatcatcctcaacaac
gcctcgcccgaggaccatcgccgcctggccgacaacgagccgctgctgatgaagctggcc
aagctcgaatcggtgcgcgtgctcgaccagggcgaggaagcaccgatgtccgccaccgcg
ctggtcggcgagatgcaggtgctggtgccgatggccgggctgatcgacaagggcgccgaa
ctggcgcgcctggacaaggaaatccagcgcctcgacggcgaggtccagcgcgtcggcggc
aaactggccaaccaaggcttcgtcgccaaggcgccggccgaggtgctcgacaaggagcgc
gccaagctggccgaagccgaacaggcgctggccaagctgatcgagcagcgcgagaagatc
gccagtctgtaa
DBGET
integrated database retrieval system
