KEGG   Pseudomonas cavernae: D3880_06020
Entry
D3880_06020       CDS       T08208                                 
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
pcav  Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcav03009]
    D3880_06020 (der)
Ribosome biogenesis [BR:pcav03009]
 Prokaryotic type
  GTPases
   D3880_06020 (der)
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU Dynamin_N AIG1 RsgA_GTPase AAA_22 cobW Roc Ras DUF5906 ABC_tran AAA_24 NTPase_1 TniB SRPRB AAA_18 NOG1
Other DBs
NCBI-ProteinID: AYC31961
UniProt: A0A385YZW7
LinkDB
Position
1301012..1302481
AA seq 489 aa
MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEARWQGRTYIVIDTGGI
SGDEEGIDAKMAEQSLQAIEEADIVLFMVDARAGLSAADQMIGEHLRKRNKRSLLVANKI
DNLDPDVARAEFSPMGLGDALPIAGAHGRGITQLLEAALGGFPKDDEEQEEAHAEEVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDHPGTTRDSIYIPFERE
GEKYTLIDTAGVRRRGKINEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVDHDLNLLGF
ALETGRSLVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV
QAAFKSAITRWPTSRLTQILEDAVQEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQVE
AVPKSYSRYLENTYRRVLKLVGTPIRIEYKGGDNPYEGKKNTLTDRQVNKKRRLMSHHKK
AEKKRRDKR
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggttcccgtaatcgccctggtgggccggccgaacgtcggcaaatccaccttgttcaac
cgcctgaccaggagccgcgacgccatcgtcggcgacctttccggtctgacccgtgatcgt
cagtacggtgaggcgcgctggcaggggcgtacctacatcgtgatcgacaccggcggcatt
tccggcgacgaggagggcatcgacgcgaagatggccgagcagtcgctgcaggccatcgag
gaagccgacatcgtgctgttcatggtcgacgcccgcgccggcctgtcggcagccgaccag
atgattggcgagcacctgcgcaagcgcaacaagcgcagcctgctggtggcgaacaagatc
gacaacctcgatccggatgtggcgcgtgccgaattcagcccgatgggcctcggcgatgcc
ctgccgatcgccggtgcgcatggtcgcggcatcacccagttgctggaagcggcactcggc
ggcttccccaaggatgacgaggaacaggaagaagcgcacgccgaagaggtggccgaaggc
gaggaagccaagcgcattcccgggccgagcgagaaggatggcatcaagatcgccatcatc
ggtcggcccaacgtcggcaaatcgaccctggtcaaccgcatgctcggcgaggagcgggtg
atcgtttatgaccatcccggtaccacccgcgacagcatctacatccccttcgagcgcgag
ggcgagaaatacaccctgatcgataccgccggtgtgcgccggcgcggcaagatcaacgag
gcggttgagaagttctcggtagtcaagacgctgcaggcgatccaggacgccaacgtggtg
atcttcgtcatggatgcccgtgaaggggtggtcgaccacgacctcaacctgctcggtttc
gccctggaaaccggccgctcgctggtcatcgccctgaacaagtgggacggcatggaaccg
ggtgagcgcgattacgtgaagaccgagctggagcgccggctgttcttcgtcgacttcgcc
gatatccacttcatttccgcgctgcacggcaccggcgtcggccatctgtacaagtcggtg
caggctgcgttcaagtcggcgatcacccgctggccgaccagccgcctgacccagatcctc
gaggacgcggtgcaggagcaccagccgccgctggtcaatggccggcgcatcaagctgcgc
tacgcccacctcggcggtgccaacccgccgctgatcgtgatccacggcaatcaggtcgag
gcggtgcccaagtcctactcgcgctacctggagaacacctaccggcgcgtgctcaagctg
gtcggcacgccgatccgcatcgagtacaagggcggcgataacccctacgagggcaagaag
aacaccctcaccgaccgccaggtgaacaagaagcgccggctgatgagccaccacaagaag
gccgagaagaagcgccgcgacaaacgctga

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