Pseudomonas cavernae: D3880_06020
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Entry
D3880_06020 CDS
T08208
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcav03009
]
D3880_06020 (der)
Ribosome biogenesis [BR:
pcav03009
]
Prokaryotic type
GTPases
D3880_06020 (der)
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Paralog
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GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
AAA_22
cobW
Roc
Ras
DUF5906
ABC_tran
AAA_24
NTPase_1
TniB
SRPRB
AAA_18
NOG1
Motif
Other DBs
NCBI-ProteinID:
AYC31961
UniProt:
A0A385YZW7
LinkDB
All DBs
Position
1301012..1302481
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEARWQGRTYIVIDTGGI
SGDEEGIDAKMAEQSLQAIEEADIVLFMVDARAGLSAADQMIGEHLRKRNKRSLLVANKI
DNLDPDVARAEFSPMGLGDALPIAGAHGRGITQLLEAALGGFPKDDEEQEEAHAEEVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDHPGTTRDSIYIPFERE
GEKYTLIDTAGVRRRGKINEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVDHDLNLLGF
ALETGRSLVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV
QAAFKSAITRWPTSRLTQILEDAVQEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQVE
AVPKSYSRYLENTYRRVLKLVGTPIRIEYKGGDNPYEGKKNTLTDRQVNKKRRLMSHHKK
AEKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccggccgaacgtcggcaaatccaccttgttcaac
cgcctgaccaggagccgcgacgccatcgtcggcgacctttccggtctgacccgtgatcgt
cagtacggtgaggcgcgctggcaggggcgtacctacatcgtgatcgacaccggcggcatt
tccggcgacgaggagggcatcgacgcgaagatggccgagcagtcgctgcaggccatcgag
gaagccgacatcgtgctgttcatggtcgacgcccgcgccggcctgtcggcagccgaccag
atgattggcgagcacctgcgcaagcgcaacaagcgcagcctgctggtggcgaacaagatc
gacaacctcgatccggatgtggcgcgtgccgaattcagcccgatgggcctcggcgatgcc
ctgccgatcgccggtgcgcatggtcgcggcatcacccagttgctggaagcggcactcggc
ggcttccccaaggatgacgaggaacaggaagaagcgcacgccgaagaggtggccgaaggc
gaggaagccaagcgcattcccgggccgagcgagaaggatggcatcaagatcgccatcatc
ggtcggcccaacgtcggcaaatcgaccctggtcaaccgcatgctcggcgaggagcgggtg
atcgtttatgaccatcccggtaccacccgcgacagcatctacatccccttcgagcgcgag
ggcgagaaatacaccctgatcgataccgccggtgtgcgccggcgcggcaagatcaacgag
gcggttgagaagttctcggtagtcaagacgctgcaggcgatccaggacgccaacgtggtg
atcttcgtcatggatgcccgtgaaggggtggtcgaccacgacctcaacctgctcggtttc
gccctggaaaccggccgctcgctggtcatcgccctgaacaagtgggacggcatggaaccg
ggtgagcgcgattacgtgaagaccgagctggagcgccggctgttcttcgtcgacttcgcc
gatatccacttcatttccgcgctgcacggcaccggcgtcggccatctgtacaagtcggtg
caggctgcgttcaagtcggcgatcacccgctggccgaccagccgcctgacccagatcctc
gaggacgcggtgcaggagcaccagccgccgctggtcaatggccggcgcatcaagctgcgc
tacgcccacctcggcggtgccaacccgccgctgatcgtgatccacggcaatcaggtcgag
gcggtgcccaagtcctactcgcgctacctggagaacacctaccggcgcgtgctcaagctg
gtcggcacgccgatccgcatcgagtacaagggcggcgataacccctacgagggcaagaag
aacaccctcaccgaccgccaggtgaacaagaagcgccggctgatgagccaccacaagaag
gccgagaagaagcgccgcgacaaacgctga
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