Pseudomonas cavernae: D3880_06270
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Entry
D3880_06270 CDS
T08208
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3880_06270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_06270
Transporters [BR:
pcav02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
D3880_06270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Ral
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AYC32008
UniProt:
A0A385Z2M5
LinkDB
All DBs
Position
complement(1353527..1354687)
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AA seq
386 aa
AA seq
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MFVHKTALLSALATALLASTSLQAAEALKAVGAGEGRLDIVAWPGYIERGETDKNYDWVT
QFEKDTGCKVNIKTAATSDEMVSLMNKGGYDLVTASGDASLRLIYGKRVQPIDPKLVPNW
KNLDPRLGGGDWYTVDGKTYGTPYQWGPNLLMYNTKAFSKAPDSWSAVFEAQQLADGKPN
KGRVQAYDGPIYIADAALYLKSAQPDLAINDPYELNEKQYAAVLELLRKQHTLVHRYWHD
ATVQMSDFKNEGVVASSTWGYMANTLKAEGQPVATVFPKEGVTGWADTTMLHADAKHPNC
AYKWMDWSLEPKVQGDLAAWFGSLPAVPAGCKASELLGAGGCATNGYDQFDRIAFWKTPQ
AKCKTQGQCVPYSRWTQDYIAIMGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcacaagactgctttgctcagtgcgctcgccaccgccctgctggccagcacc
agcctgcaggccgccgaagcgttgaaagccgtgggcgccggcgaagggcgtctggatatc
gtcgcctggccgggctacatcgagcgcggcgaaaccgacaagaactacgactgggtcacc
cagttcgagaaggacaccggctgcaaggtcaacatcaagaccgcggcgacctccgacgag
atggtcagcctgatgaacaagggcggctacgacctggtcaccgcctccggcgacgcctcg
ctgcgcctgatctacggcaagcgcgtgcagccgatcgatccgaaactggtgcccaactgg
aagaacctcgacccgcgcctgggaggcggcgactggtataccgtcgatggcaagacctac
ggtacgccctaccagtggggcccgaacctgctgatgtacaacaccaaggcgttcagcaag
gcgccggacagctggagtgcggtgttcgaggcgcagcagctggccgacggcaagccgaac
aagggccgcgtgcaggcctacgacgggccgatctatatcgccgacgcggcgctgtacctg
aaatccgcccagccggatctggccatcaacgacccctacgagctcaacgaaaaacagtac
gccgccgtgctcgagctgctgcgcaagcaacacacgctggtccaccgctactggcacgac
gccacggtacagatgagcgacttcaagaacgaaggcgtggtcgcctccagcacctggggc
tacatggccaataccctgaaggccgaagggcagccggtggccaccgtgttcccgaaagaa
ggggtcaccggctgggccgacaccaccatgctgcatgccgacgccaagcacccgaactgc
gcctacaagtggatggactggtcgctggagcccaaggtgcagggcgacctggccgcatgg
ttcggctcgctgccggcggtaccggccggttgcaaggccagtgaactgctcggcgccggc
ggctgcgccaccaacggctacgaccagttcgaccgcatcgccttctggaaaaccccgcag
gccaagtgcaagacccagggccagtgcgtgccatacagccgctggacgcaggactacatc
gcgatcatgggcggtcggtaa
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