Pseudomonas cavernae: D3880_06420
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Entry
D3880_06420 CDS
T08208
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00061
Fatty acid biosynthesis
pcav00071
Fatty acid degradation
pcav01100
Metabolic pathways
pcav01212
Fatty acid metabolism
pcav02024
Quorum sensing
pcav04146
Peroxisome
Module
pcav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D3880_06420
00071 Fatty acid degradation
D3880_06420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D3880_06420
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3880_06420
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcav01004
]
D3880_06420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcav04147
]
D3880_06420
Enzymes [BR:
pcav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D3880_06420
Lipid biosynthesis proteins [BR:
pcav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D3880_06420
Exosome [BR:
pcav04147
]
Exosomal proteins
Exosomal proteins of breast milk
D3880_06420
Exosomal proteins of breast cancer cells
D3880_06420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
HTH_28
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
AYC32038
UniProt:
A0A385Z2R2
LinkDB
All DBs
Position
complement(1391483..1393270)
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AA seq
595 aa
AA seq
DB search
MSAVPQPPHDLPSIPALLAWRAATTPDWPATQQRLHDGRWQSLSWGEVAAQANRLARALI
AHGVKPGDRVAIWSRTRVEWSLLDFAILNVGAVSVGLYPSLSPNQAAQQLQRAGCRLLFV
EHSSQALPLHEDGLSVVCIDEALAGSGHVPLEQFRAGAERIPADQLEQRWRALGPQSLAN
LVFTSGTTGEPKAAMLGHANLLAFISQYQVATGRYTSVAFLPMAHVGERVIGHYQRLWAG
AQAAYVPDLNDIQRALAEVQPDFFGSVPRLFEKFHAAVKAQRAALPPGKQRLFDWALATG
ARRARGQGNALSGWLARRLVLDKLRTKLFGARIRTLVGGGAPLDAHLVEFYAALGLPLRE
GWGMSESTAFLTSNEAGIAKAGSVGRALSGTELRIADDGEVLVRGPLVFQGYFGQPEKTA
ETFSADGWLRSGDLGRIDADGYLWLTGRKKELIITAGGKNIAPSAIEARLKQQPLVEQAL
VHGDRRKYLAALLALDPERLAAWARRLGLGGGHADWLQAPALRSELQAHIDEVNAELAQV
ERIKAWALLPRLLSQDEDELTPTQKLKRPLIERHFAELLESLYAEDSPVTARRLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagtaccgcaaccgccccacgacctgcccagcatccccgcgctgctcgcctgg
cgcgcggcgaccacgccggattggccggccacccaacagcgcctgcacgacggccgctgg
caaagcctgagctggggcgaagtcgccgcgcaagccaatcggctcgcccgcgccctgatc
gcccacggcgtaaagcccggcgaccgggtggcgatctggagtcgcacccgagtcgagtgg
agcctgttggatttcgccatcctcaacgtcggcgcggtcagcgtcggcctgtatcccagc
ctcagccccaaccaggcggcgcagcaactgcaacgcgccggctgtcgcctgctgttcgtc
gagcactccagccaggccctgccgttgcacgaagacggcctgagcgtggtgtgtatcgat
gaagccctggccggtagcggccatgtgcctctcgagcagttccgcgctggcgccgaacgt
atccccgccgaccagctggaacagcgctggcgggcgctcggcccgcagtcgctggccaat
ctggtgtttacctccggcaccaccggcgagccgaaggcggcgatgctcggccatgccaat
ctgctggccttcattagccagtaccaagtcgccaccgggcgctataccagcgtcgccttc
ctgcccatggcgcatgtcggcgaacgggtgatcggccactaccagcgcctctgggccggc
gcgcaggccgcctatgtgccagatctcaacgacatccagcgggcgctggccgaggtgcag
ccggacttcttcggcagcgtgccgcgcctgttcgagaagttccacgccgcggtcaaggcc
caacgcgccgccctgccgcccggcaagcagcgcctgttcgactgggccttagcgaccggg
gcacggcgcgcccgcggccagggcaacgcgctgagcggctggctggcccgccgtctggtg
ctcgataagctgcgcaccaagctattcggcgcgcgcatccgcaccttggtcggcggcggt
gcgccgctggatgcgcatttggtcgagttctacgccgcgctcggcctgccgctgcgcgaa
ggctggggcatgtcggaatccaccgccttcctgaccagcaacgaggcgggcatcgccaag
gccggctcggtcggcagggcgctgtcgggcaccgagctgcgcatcgccgacgatggcgag
gtgctggtgcgcgggcccttggtgttccagggctatttcggccaaccggagaagaccgcc
gagaccttcagcgcagacggctggctgcgcagcggcgacctcggccggatcgacgcggac
ggctacctgtggctgaccgggcgcaagaaggagctgatcatcaccgccggcggcaagaac
atcgcgccgagcgccatcgaggcgcgcctcaagcagcagccgctggtcgagcaggcgctg
gtgcatggcgaccggcgcaagtacctcgccgccctgctcgccctcgacccggaacgcctg
gccgcctgggcacgccggctggggctgggcggcggccatgccgactggctgcaggcgccg
gcgctgcggagcgagctgcaggcgcatatcgatgaggtcaacgccgaactggcgcaggtc
gagcggatcaaggcctgggccctgctaccgcgcctgctcagtcaggacgaggacgagctg
acgccgacccagaagctcaaacgcccgctgatcgagcggcatttcgccgagttgctggaa
agcctgtatgccgaggacagtccagtgacggcgcgccggctggggtga
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