Pseudomonas cavernae: D3880_06675
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Entry
D3880_06675 CDS
T08208
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pcav03029
]
D3880_06675 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_06675 (bamA)
Mitochondrial biogenesis [BR:
pcav03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
D3880_06675 (bamA)
Transporters [BR:
pcav02000
]
Other transporters
Pores ion channels [TC:
1
]
D3880_06675 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
POTRA_2
YqfD
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
AYC32084
UniProt:
A0A385Z022
LinkDB
All DBs
Position
1450119..1452539
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AA seq
806 aa
AA seq
DB search
MKRLLLPVALATLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGDKADDRELVD
ATRSLFKTGFFQDIQLGRDGNVLVITVVERPSISSIEIEGNKAISSEDLLKGLNQSGLAE
GEIFQRATLEGVRNELQRQYVAQGRYSAEIETEVVPQPRNRVALKININEGTVAAIQHIN
VVGNTVFPEQELIDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIS
STQVSITPDKKHVYITVNVDEGQKYSVREVKLSGDLKVPEDDVKALLLVKKGQVFSRKVM
TTTSELITRRLGNEGYTFANVNGVPEAHDDDHTVSITFVVDPGKRAYVNRINFRGNTKTE
DEVLRREMRQMEGGWASTYLIDQSKTRLERLGYFKEVSVETPQVAGTDDQVDVNYSVEEQ
PSGSITASVGFAQNAGLILGGSISQNNFLGTGNKVSIGLTRSEYQTRYNFGFVDPYWTVD
GVSLGYNAFYRTTDYDELDVDVSSYAVDSYGGGISIGYPISETSRLTYGLTAQQDKIKTG
TFTVDEIVDFIDQEGDNYTNFKASVGWSESTLNKGVLANRGHSQSLVLESTIPGSDLSFY
KLDYRGQIFKPLTQQTALRFHTELGYGDSYGSTSELPFYEHYYAGGFNSVRGFEDSSLGP
RSTPSVARRADGSIITDGTAGADGRFTDPDQDPLPFGGNVLIQGGMEYLFPLPFVKDQRQ
LRTVLFWDVGNVFDTNCSSEQKNGVPGGRGKDEACDLDLNNLASSVGVGLTWITALGPLS
FSLAMPVKKPDEADTQVFQFSLGQTF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtctgctgctgcctgtggcgctagccacactgatgatcgccgaagttcacgcc
gagtccttcactatctccgatattcgcgttaatggtttgcagcgggtttccgccggcagc
gtattcggcgctttgccccttaacgttggcgacaaagccgatgatcgtgagctggtcgat
gccacccgttcgttgttcaaaaccgggttttttcaggatatccagctaggccgtgatggc
aatgtattggtcatcaccgtggtcgagcgcccctccatctccagtatcgagatcgaaggt
aacaaggccatttcgagcgaagacttgctcaagggcttgaatcagtctggcttggcggaa
ggagagatttttcagcgcgccactctcgaaggtgtgcgcaacgagttgcagcggcaatat
gtggcccaagggcgctactcggccgaaatcgagaccgaagtggttccccaaccgcgcaac
cgtgtggcgttgaaaatcaatattaatgagggcacggttgcggccattcaacatatcaac
gtggttggcaacaccgtcttccctgagcaagagttaatcgacctcttcgaactgaaaacc
accaactggctgtcgttcttcaagaacgacgacaagtacgcccgcgaaaagctttccggt
gacttggagcgtctacgctcctactacctcgatcgcggctacatcaatatggatatctcc
tcgacccaggtctccatcacaccggacaaaaagcacgtctatatcactgtcaacgtcgac
gaggggcagaagtacagcgtgcgcgaggtgaaactctccggtgacctgaaggtcccggaa
gatgacgtcaaggcgttgctgctggtcaagaaggggcaagtattttcgcgcaaggtgatg
accaccacttccgagctgattacccggcgcttgggtaacgagggctacactttcgccaac
gtcaacggtgtgccggaagcgcacgatgacgaccataccgtttcgatcaccttcgtcgtc
gatcccggcaagcgcgcttatgtcaaccgcatcaacttccgtggcaataccaagaccgag
gacgaggtgctgcggcgcgagatgcgacaaatggaaggtggctgggcctctacctatttg
atcgatcagtccaagactcgcctggagcgtttgggctacttcaaggaagtgagcgtcgaa
actccgcaagtcgcggggaccgatgaccaggttgacgtcaattacagcgtcgaagagcag
ccgtccggttccatcaccgccagcgtgggctttgcccagaacgcaggcctgatccttggt
ggctccatcagccagaacaacttcctcggtactggcaacaaggtcagcatcggtctgact
cgcagcgagtaccagacccgctataacttcggcttcgtcgacccctactggactgtcgat
ggcgtaagcttgggctacaacgccttttatcgcaccactgattacgatgaactggatgtc
gatgtatccagctatgcggtagatagctatggcggcggtatcagcatcggctatccgatc
agcgagacttcgcgtctcacctacggcttgaccgcacagcaagacaaaatcaagacgggc
accttcaccgtcgatgagatcgtggatttcatcgatcaggaaggtgacaactacacgaac
ttcaaagcttccgttggctggtcggaatcgaccctgaacaagggtgtgctggccaaccgc
ggccattcacagagtctggtattggaaagcaccattcctggcagcgatctgtcgttttat
aaactcgattaccgcggtcagatcttcaagccgttgacccagcaaaccgcgctgcgtttc
cataccgaactcggctatggcgacagctatggttcgacttccgagctgccgttctacgag
cattattacgctggtggatttaactcggtgcgtggcttcgaagacagcagcctcggccct
cgcagtaccccgagcgtggcgcgtcgggcagatggctcgattatcactgatggtaccgcc
ggcgccgatggtcgctttaccgaccccgaccaagacccattgccctttggtggcaacgtg
ctgattcagggtggcatggaatatttgttccccttgcctttcgtcaaggatcaacgccag
ttgcgtacggtgttgttctgggatgtgggtaatgtgttcgacaccaattgcagcagtgag
caaaagaatggcgtgccgggcgggcgtggcaaggacgaggcttgcgacctcgacctcaac
aatctggccagttctgtgggtgtcggtttgacctggattaccgcgctgggcccgttgagt
ttcagcttggccatgccggtcaagaaaccggatgaggcggatacccaggtattccaattc
tcccttggtcagacgttctaa
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