Pseudomonas cavernae: D3880_06770
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Entry
D3880_06770 CDS
T08208
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcav03016
]
D3880_06770 (truD)
Enzymes [BR:
pcav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
D3880_06770 (truD)
Transfer RNA biogenesis [BR:
pcav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D3880_06770 (truD)
Prokaryotic type
D3880_06770 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DD_K
Motif
Other DBs
NCBI-ProteinID:
AYC32103
UniProt:
A0A385Z2I5
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All DBs
Position
1472246..1473304
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AA seq
352 aa
AA seq
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MNEFELLGSRAYGEAAGRAVLKATAEDFQVDEVLDIPLSGAGEHLWLWVEKRGLNTEEAA
RRLARSAGVPLRGISYAGLKDRQALTRQWFSLHLPGKADPDLAAAESPSLSILKAVRHSR
KLQRGAHAANGFTLRLTSLTGDRAALEARLQQMRAGGVPNYFGLQRFGHDGGNVVEARGF
AERHELPEQRNLRSRLLSAARSYLFNRVLAERVAEGSWNQARAGDLLAFTDSRSFFMAGE
AECDDPRLAILDLHPTGPLWGAGESPAAAQSQALEQCVAASEPALRDWLVEAGMAHERRI
LRLPIGGLTWHYPEPDVLQLEFVLPAGCFATAVVRELVDLPSVGQTENSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttcgagttgttgggctcgcgggcctacggcgaagccgcaggacgcgcggta
ctgaaagccacggcggaagacttccaggtcgatgaggtgctggatattccgttgtccggc
gcgggcgagcacctttggctgtgggtcgagaagcgtggcctgaataccgaggaggccgcg
cgtcgcttggcgcggtcagcgggggtgccgctgcgtggcatcagctatgccgggctcaag
gatcgtcaggcactgacccggcagtggttcagcctgcatctgccgggtaaggccgatccc
gacctcgccgcggcagaaagcccgagcctgagcatcctcaaggccgtgcgtcactcgcgt
aaattgcagcgcggggcgcacgcggcgaacggtttcaccctgcgtctgaccagcctcact
ggcgatcgcgcggcgttagaggcgcgtttgcagcagatgcgtgccggcggcgtgccgaat
tattttggcttgcagcgtttcggtcatgacggcggcaatgtcgtcgaggctcgcggcttc
gccgagcgtcacgaactacccgagcaacgcaatctgcgctcgcgcctgctgtcggcggcg
cgcagctacctgttcaatcgcgtgctggcggagcgcgtcgccgagggcagctggaaccag
gcacgggctggtgatctcttggccttcaccgatagccgcagcttcttcatggccggcgag
gccgagtgcgatgacccgcgcctggcgatcctcgatctgcatcccactggcccgctatgg
ggcgccggcgagtcaccagcggcagcgcaaagccaggcgctggagcaatgcgtcgcggcg
agtgaaccggctttgcgcgactggctggtcgaagcgggcatggcgcacgaacggcgaatc
ctgcgcctccccatcggcggtttgacgtggcattatcctgaacctgacgtgttgcaactg
gaattcgtcctgccggccggatgtttcgccaccgctgtggtgcgcgaactcgtcgatctg
ccgtcggtggggcagacggaaaattcatgcgtattctga
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