Pseudomonas cavernae: D3880_07215
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Entry
D3880_07215 CDS
T08208
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3880_07215 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcav03400
]
D3880_07215 (ruvB)
Enzymes [BR:
pcav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3880_07215 (ruvB)
DNA repair and recombination proteins [BR:
pcav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3880_07215 (ruvB)
RecFOR pathway proteins
D3880_07215 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_3
nSTAND3
AAA_22
Sigma54_activat
AAA_14
AAA_17
AAA_16
Mg_chelatase
Rad17
RNA_helicase
ABC_tran
AAA_28
TsaE
AAA_18
Resolvase
NTPase_1
NB-ARC
Sigma54_activ_2
AAA_24
RsgA_GTPase
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AYC32183
UniProt:
A0A385Z2R7
LinkDB
All DBs
Position
1556250..1557299
Genome browser
AA seq
349 aa
AA seq
DB search
MIEADRLITATGRDRDEQFDRAIRPLRLAEYIGQPNVREQMELFIQAAKQRSEALDHTLI
FGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAMLTNLEPGDVLFIDEIHRLSP
IVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGMLTNPLRDRFGIVQR
LEFYGVEDLTTIVGRSAGILGLPVEAEGAFEIARRARGTPRIANRLLRRVRDFAEVRAQG
QINRTTADLALNLLDVDERGFDHQDRRLLLTLIEKFDGGPVGVDSLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNLPKRMSELPAADLFASDE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagccgaccgcctgataaccgccacgggacgtgatcgcgatgagcagttcgac
cgcgccatccgcccgttgcgcctggccgaatacattggccagccgaatgtgcgcgagcag
atggagctgttcattcaggccgccaagcagcgcagcgaggccctggaccacaccctgatc
ttcggtccgccggggctcggcaagaccaccctggccaatatcatcgcccaggagatgggc
gtgtcgatcaagagcacctccgggccggtactggagcgcccgggtgacttggcggcgatg
ctgactaatctcgagccgggcgatgtgctgttcatcgacgaaattcatcgcctgtcgccg
atcgtcgaggaagtgctgtatccagccatggaggatttccagctcgacatcatgatcggc
gaaggcccggcggcgcgctcgatcaagctcgatctgccgcccttcaccctgatcggcgcc
accactcgtgccggcatgctgaccaacccgctgcgtgatcgtttcggcatcgttcagcgc
ctggagttctacggtgtcgaggatctgaccaccatcgtcggtcgttcggcggggattctt
gggctgccggtcgaagccgagggggctttcgagatcgcccgccgcgctcgcggtacgccg
cggatcgccaaccgcctgctgcgccgggtgcgggacttcgccgaagtgcgggcccagggg
cagatcaatcgaaccactgccgatctggctctgaatctgctggatgtcgacgagcgcggc
ttcgatcaccaggaccgccgcctgttactgaccctgatcgagaagtttgatggcggcccg
gtgggggtggacagcctggccgcggcgatcagcgaggagcgccacaccatcgaggatgtg
ctggagccctatctgatccagcaaggctatatcatgcgcaccccgcgcgggcgggtggtg
acccggcatgcctacctgcatttcggtctgaatctgccgaaacgcatgagcgagctgccc
gctgcggatctgtttgccagtgacgagtaa
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