Pseudomonas cavernae: D3880_09090
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Entry
D3880_09090 CDS
T08208
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02020
Two-component system
pcav02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3880_09090
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D3880_09090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcav02022
]
D3880_09090
02035 Bacterial motility proteins [BR:
pcav02035
]
D3880_09090
Two-component system [BR:
pcav02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
D3880_09090
Bacterial motility proteins [BR:
pcav02035
]
Flagellar system
Flagellar assembly proteins
Others
D3880_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
MCM
HTH_20
MerR
Mg_chelatase
HTH_30
AAA_2
AAA_3
AAA_19
AAA_22
HTH_24
AAA
nSTAND3
FleQ
HTH_11
HTH_23
Sigma70_r4_2
AAA_7
HTH_28
HTH_17
ATPase
Myosin_head
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AYC35060
UniProt:
A0A385Z8S7
LinkDB
All DBs
Position
1966987..1968393
Genome browser
AA seq
468 aa
AA seq
DB search
MTAKILLVEDDRALREALADTLLIGGHEYLAVDCAETALEALGREVFSLVISDVNMPGMD
GHQLLGRIRAQYPQLPVLLMTAFGAVERAVDAMRQGAADYLVKPFEPQVLLELVARHALG
RLGRGDSDGPVAMEPASRQLLELAARVARSDSTVLITGESGTGKEVLARYIHQQSPRATK
PFIAINCAAIPDNMLEATLFGHEKGAFTGAIAAQPGKFELADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIVLDIRVLATSNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLGKHAKKMNQANVRLSPEAQRCLVVHAWPGNVRELDNAIQRALIL
QQGGLIQPHDLCLTAPIGLAPAPLMPPPVLSVASPVSLVEAPLAEPASALGEDMRRHEYQ
MIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaaatcctattggtcgaagatgaccgcgcgctgcgcgaggccctggccgat
accctgctgatcggcgggcatgagtacctggcggtggattgcgccgaaaccgcgctcgag
gcgctcggccgcgaggtgttcagcctggtgatcagtgacgtcaacatgccgggcatggat
ggccatcagttgctcgggcgtatccgcgcgcaatacccacagttaccggtgttgctgatg
acggccttcggcgcggtcgagcgggcggtggatgccatgcgccagggcgcggccgactat
ctggtcaagcccttcgaaccgcaggtgctgctggagttggtggcgcgccatgcccttggc
cgtctcggtcgtggcgacagcgacggtcccgtggcgatggaaccggccagccgacagctg
ctggaattggccgcccgggtggcgcgcagcgactcgaccgtgctgatcaccggcgagtcc
ggtaccggcaaggaggttctggcgcgctacattcaccagcagtcgccgcgtgcgaccaag
cccttcatcgccatcaactgtgcggcgattcccgacaacatgctcgaggccaccttgttc
ggtcacgaaaagggcgccttcaccggcgccattgccgcgcagccgggcaagttcgagttg
gccgacggcggcaccattctgctcgacgagatttccgagatgccgctaggcctgcaggcc
aagctgttgcgcgtgttgcaggagcgtgaggtggagcgggtcggtgcgcgcaagccgatt
gttctggacatccgcgtgctggccaccagcaaccgcgatctggccggggaagtggcggcc
gggcgtttccgtgaggatctgtactaccggctttcggtattcccgctggcgtggcgcccg
ctgcgtgaacgcaccgccgatattctgccgctggccgagcgcctgctcggcaagcacgcc
aaaaaaatgaatcaggccaatgtgcgcctgtcgccggaggcgcagcgttgcctggttgtc
catgcctggccgggcaatgtgcgcgagctggacaacgccatccagcgcgcgttgattctc
cagcagggcgggctgatccagccgcacgacctgtgcctgaccgcgccgatcggcctggca
ccggcgccgctcatgccgccgccggtgctgtcggtggcgagcccggtcagcctggtcgaa
gcgccgctggccgagcccgcgagcgccttgggcgaagacatgcgtcgccacgagtatcag
atgatcatcgacaccttgcgttccgagcgcggccgccgcaaggaggccgccgagcgcctg
ggcatcagcccacgcaccctgcgttacaagctggcgcagatgcgtgatgcgggaatggat
gtcgaggcttatctgttcgccagctga
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