Pseudomonas cavernae: D3880_09360
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Entry
D3880_09360 CDS
T08208
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcav03000
]
D3880_09360
Transcription factors [BR:
pcav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
D3880_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_24
HTH_IclR
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
AYC32577
UniProt:
A0A385Z363
LinkDB
All DBs
Position
complement(2019108..2019746)
Genome browser
AA seq
212 aa
AA seq
DB search
MSSIRERNKEQILRAASEEFADKGFAATKTSDIAAKAGLPKPNVYYYFKSKENLYREVLE
SIIEPLLAASAPFNEDGHPAQVLKAYIRSKIRISRELPYASKVFASEIMHGAPHLSAEQI
EQLNAQAKHNIGCLQRWIDQGLMAKVDPHHLVFSIWAATQTYADFDWQISTVTGKAKLDD
ADYEAAAETIIRLVLKGCEVAEPVASEQVKSA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattcgcgagcgcaataaagaacaaatcctgcgcgcggccagtgaagagttt
gccgacaagggcttcgccgccaccaagaccagcgacatcgcggccaaggctggcttgccc
aagcccaatgtctactactacttcaagtcgaaagagaacctctaccgcgaggtgctcgag
agcatcatcgagccgctgctggcggcctccgcgccattcaacgaagacggccatccggcg
caggtgctcaaggcctacatccgctcgaagatccgcatttcccgcgagctgccctacgcc
tccaaggtgttcgccagcgaaatcatgcacggcgcgccgcacctgtcggcggaacagatc
gagcaactcaatgcccaggccaagcacaacatcggctgcctgcagcgctggatcgatcag
ggtctgatggccaaggtcgacccccatcacctggtgttcagcatctgggccgcaacccag
acctacgccgactttgattggcagatctccacggtcaccggcaaggccaagctcgacgat
gccgactacgaggccgccgccgaaaccatcatccgcctggtgctcaagggctgcgaggtg
gccgagccggtcgccagcgagcaggtgaaaagcgcctga
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