Pseudomonas cavernae: D3880_09515
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Entry
D3880_09515 CDS
T08208
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcav03036
]
D3880_09515 (smc)
Chromosome and associated proteins [BR:
pcav03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
D3880_09515 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
DUF4763
BORCS7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AYC32607
UniProt:
A0A385Z384
LinkDB
All DBs
Position
2056982..2060470
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKCIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSNTRKPVTQASIELIFDNADGSLGGEYAQYAEISIRRRVTRDGQNVYFLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLAALRWQAL
NQQVGQREAVIGNQEVSFEALVAEQRNADASIERLRDGHHDLSERFNQVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLNEAERARLETESHLGHDRTLLATLGEELDMLVPEQEMSA
AAAEEASAQLEEAEGAMHAWQEQWDAFNQRSAEPRRQAELQQARIQQLEQSLERLAERQR
RLGDEHRQLAADPEDAAILELAEQVAASELNLEELHAAELELVEGLEQLRGELQQAGQAQ
QQAQGELQRLNGRIASLEALQQAALNPGKGATEWLREQQLSERPRLAEGLRVEPGWELAV
ETVLGADLQAVLLDDYESLDLASFTQGDLRLVSPARGGVRVVGSLLDKVEAGVDLAPWLA
RVKPVESLDQALAMRVQLADGDSLISRDGYWVGRHFLRVRRASAAESGVLARGQELERLS
GERDEREATLAALDERLQQLRERQRQQEETREQQRRRLQDEARHQGELKAQLSAGQAKVE
QLTLRRRRLDEELHELGEQRGSEQEQLGESRLQLQDALDAMAIDTEQREALLAQRDQLRE
RLDRVRQESRQHKDQAHQLAVRLGSIRAQHESTRQALERLELQFARSLERREQLTLNLEE
GAAPLEELRMKLEELLEKRMGVEDELKQARLALEDADRELRDAEKRRTQAEQQAQLLRGQ
LEQQRLEWQALSVRRKTLQDQLLEDGYDLHGVLATLPGEASESAWEEELERLAARIQRLG
PINLAAIDEYQQQGERKRYLDAQNADLVEALDTLENVIRKIDKETRNRFKETFDQINGGL
QALFPKVFGGGNAYLELTGEDLLDTGVSIMARPPGKKNSTIHLLSGGEKALTALALVFAI
FQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSEKVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEALAMVEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaagtgcatcaagctggcgggcttcaagtcgttcgtcgaccccaccaccgtc
agctttccgagcaacatggccgccgtggtcgggcccaatggttgcggcaagtccaacatc
atcgacgccgtacgctgggtgatgggcgagagttcggcgaagaatctccgcggcgagtcg
atgaccgacgtcatcttcaacggctccaacacccgcaagccggtgacccaggccagcatc
gagctgatcttcgacaacgccgatggcagtctcggcggcgaatacgcccagtacgcggaa
atctccatccgtcgccgcgtgacccgcgacgggcagaacgtctacttcctcaacggcacc
aagtgccggcgccgcgacatcaccgatatcttccttggcaccggcctcggcccgcgcagc
tactcgatcatcgagcagggaatgatttccaagctgatcgaggccaagcccgaggatctg
cgcaatttcatcgaggaagccgccggcatctccaagtacaaggagcgccgccgcgagacc
gagaaccgcatccgccgcacccacgagaacctggcgcgtctgaccgacctgcgcgaggaa
ctggagcgccagctggagcgcctgcaccggcaggcccaggcggcggagaagtatcaggaa
tacaaggccgaggagcgccagctcaaggcccagctggcggccctgcgctggcaggcgctg
aaccagcaggtcggccagcgcgaggcggtgatcggcaaccaggaggtcagcttcgaagcg
ctggtggccgagcagcgcaatgccgacgccagcatcgagcgcctgcgcgacggccatcac
gacctgtccgagcgcttcaatcaggtgcaggggcgcttctattcggtgggtggcgatatc
gcccgagtcgagcagagcatccagcatggccagcaacgtctgcgccagctgcaggatgac
ctcaacgaggccgaacgggcgcgcctggaaaccgaatcgcacctcggccacgaccgcacc
ctgctcgccactctcggcgaggagctggacatgctggtccccgaacaggagatgagcgcc
gccgccgccgaggaagcttccgctcaattggaagaggccgaaggcgccatgcacgcctgg
caggagcagtgggacgccttcaaccagcgttccgccgagccgcgccggcaggccgagctg
cagcaggcgcgcatccagcagctggagcagagtctggagcgcctggccgagcgccagcgc
cgcctgggcgacgaacaccggcaactggccgccgaccccgaggacgcggcgatcctcgaa
ctcgccgagcaggtcgccgccagcgagctgaatctggaagagctgcatgctgccgaactg
gaactggtcgagggtttggagcagctgcgcggcgaactgcagcaggccggccaggcccaa
caacaggcgcagggcgaactgcagcgcttgaacggccgcatcgcctcgctcgaggcgcta
caacaggcggcgctgaatcccggcaagggcgcgaccgagtggctgcgcgagcagcagctg
agtgagcggccgcgcctggccgagggcttgcgcgtcgagccgggctgggagctggcggtg
gaaaccgtgctcggcgccgacctgcaggcggtgctgctggatgattacgaaagtctcgat
ctggctagcttcactcagggcgatctgcgcctggtcagcccggccaggggtggcgtgcgg
gtggtcggcagcctgctcgacaaggtcgaggccggtgtcgacctggcgccctggctggcc
cgggtcaagccggtggagtcgctcgaccaggccttggctatgcgcgtccagctagctgat
ggcgacagcctgatcagccgcgacggctactgggtcggccgccatttcctccgcgtgcgg
cgcgccagcgcagcggaaagtggcgtgctggcgcgcggccaggagctggagcgcctgagc
ggcgagcgtgacgagcgcgaagcgacgctggcggctctcgatgaacgtttgcagcagctg
cgcgagcgccagcgccagcaggaagagacccgcgagcagcaacgccgccgcctgcaggac
gaggcacgccatcagggcgaactgaaggcgcagctgtccgccggccaggccaaggtcgag
caactgaccttgcgccgccgccgtctcgacgaggaattgcatgagctgggcgagcagcgc
ggcagcgaacaggagcaactcggcgaatcgcgcctgcaactgcaggacgcgctggacgcc
atggccatcgacaccgagcagcgcgaggcgctgctggcgcagcgcgaccaactgcgcgag
cgcctcgatcgtgtgcgccaggaatcgcgccagcacaaggaccaggcacatcagctggcc
gtgcgtctgggctcgatccgcgcccagcacgagtccacccgccaggccctggagcgtctc
gagctgcagttcgcccgcagcctcgagcgccgcgagcaactcacgctgaacctggaggag
ggcgccgcgccgctcgaagagctgcgcatgaagctggaagagctgctggaaaagcgcatg
ggcgtggaggacgagctcaagcaggcccgtctggccctggaggacgccgaccgcgaactg
cgcgacgccgagaagcgccgcacccaggccgagcagcaggcgcaactgttacgcggccag
ctcgagcagcagcgcctggaatggcaggccctcagcgtgcggcgcaagaccctgcaggat
cagttgctggaagacggctacgacctgcacggcgtgcttgccaccttgcccggcgaggcc
agcgaaagtgcctgggaagaagaattggagcgtctggctgcgcgtatccagcgcctcggc
ccgatcaacctggcggccatcgacgaataccagcagcagggcgagcgcaagcgctacctg
gatgcacagaacgccgacctggtggaggcgttggacaccctggaaaacgtcatccgcaag
atcgacaaggaaacccgcaaccgcttcaaggaaaccttcgaccagatcaacggcggcctg
caggcgctgttcccgaaagtcttcggcggcggcaacgcctacctggaacttaccggcgag
gatctactcgataccggggtgagcatcatggctcggccgccgggcaagaagaacagcacc
atccatctgctctcgggcggggagaaggcgttgaccgcgctggcgctggtatttgccatc
tttcagctcaatccggcgccattctgcatgctcgacgaagtggacgcgccgctggacgac
gctaacgtcggccgctacgcgcggctggtcaaggagatgtcggagaaggtgcagttcatc
tacatcacccacaacaagatcgccatggaaatggccgatcaactgatgggggtgaccatg
cacgagcccggttgctcgcggctggtggcggtggatgtggaggaggcgttggcgatggtc
gaggcctga
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integrated database retrieval system
