Pseudomonas cavernae: D3880_10130
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Entry
D3880_10130 CDS
T08208
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3880_10130
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcav01007
]
D3880_10130
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcav03016
]
D3880_10130
Enzymes [BR:
pcav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
D3880_10130
Amino acid related enzymes [BR:
pcav01007
]
Aminoacyl-tRNA synthetase
Class II (U)
D3880_10130
Transfer RNA biogenesis [BR:
pcav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D3880_10130
Prokaryotic type
D3880_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AYC32723
UniProt:
A0A385Z437
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All DBs
Position
2186175..2188553
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AA seq
792 aa
AA seq
DB search
MKFSEQWLRGWVNPQVSRDELVARLSMVGLEVDSVTPAAGNFSGVVVGEVLSTEPHPDAD
KLRVCQVSNGAESFQVVCGAPNVRPGLKIPFAMIGAELSGDFTIKKAKLRGIESNGMLCS
ASELQISEDNNGLMELAADAPVGESIRTYLGLDDVSIELGLTPNRGDCLSIAGLAREVGA
IYAAEVSPMLVEPVAAGHDEVRPVEVSAPQACPRYLGRVIQNVDLSRPTPLWMVERLRRS
DIRSINAAVDVTNYVMLEQGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHQRALAIAGVMGGEHSGVSNATRDVFLESAFFDTIALAGKARSYGLHTDSSHRFE
RGVDSQLARKAMERATALLIEIMGGEAGPIIEVVSEASLPRVAPITLRAERIAQMLGLEM
DSAEVERLLRALGLTVSSQGVGLWQVGVPSHRFDITLEVDLIEELGRLYGYNRLPVRYPQ
ARLAPQAKAEARSELPALRRLLVARGYQEAITYSFIDPKLFELFNPGVEPLQLANPISAD
MSAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLPGLKQEAMLAGVITGSRLPE
AWANGREGVDFYDLKADVEALLSHAGAVESFRFVPGEHPALHPGQTAQVERDGRLVGFIG
AIHPELARSLGLEQPLYLFELVLSEVAQGRLPKFSELSRFPEVRRDLALLVGRDVAAEAV
LATIREAAGEWLTDLRLFDVYHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVSSTTQNILT
SLEQRFNATLRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacagtggctgcggggctgggtaaatccgcaggtttcccgtgatgaa
ttggtagctcgtctgtccatggtcggcctcgaggtcgacagcgtgactccggctgccggc
aatttctccggagtggtggtgggtgaggtgctcagcacggagccgcacccggatgctgac
aagttgcgcgtttgccaggtgagcaacggcgccgaatctttccaggtggtctgcggtgcc
cccaatgttcgccccgggttgaagattccgttcgccatgattggcgcggagctgtctggc
gacttcacgatcaaaaaggccaagctacgcgggatcgagtccaacggcatgctctgctcg
gcgtctgaattgcagatcagcgaagacaataatggcctaatggagttggccgccgatgct
ccggtcggcgagagcattcgcacctatctcgggctggatgatgtgagcatcgagcttggc
ttgacgcccaaccgcggtgactgtttgtcgattgcaggtttggcccgtgaagtaggagcc
atctacgccgccgaggttagtccgatgttggtcgagcctgttgcggcgggccatgatgaa
gtacggccagtcgaagtctcggcgccacaggcttgcccgcgctatttgggacgagtgatt
caaaatgtcgacctgtctcggccgacgccgctgtggatggtcgagcgcctgcgccgttcg
gatatccgtagcatcaatgctgccgtcgatgtcaccaactacgtgatgctagagcaaggc
cagccgatgcatgcgtttgatcttgccgaaatcaatggcgggattcgagtgcgcatggca
gaagagggcgagaagctggtgctgctcgatggtcaggaagtcagcctgcgggccgatacc
ctggtaatcgccgaccaccagcgcgcgctggcaattgccggtgtgatggggggcgagcat
agcggggtgagcaacgcaactcgcgatgtgttcctggagagcgcgttcttcgacaccatt
gctttggccggtaaggcgcgctcctatggcctgcatacggactcttcgcaccggttcgag
cgtggcgtggactcccagttggcgcggaaggccatggagcgtgccactgctctgttgatc
gaaattatgggtggtgaggcggggccgatcattgaggtggtcagcgaggcgagcttgccg
cgtgtcgcaccgattaccctgcgtgccgagcgcattgctcagatgcttggtcttgagatg
gactcggctgaagtcgagcgcctgctgagagctctgggcctgaccgtgagcagccagggt
gttgggttatggcaggtcggggtgccaagccatcgcttcgatatcactctggaagtcgac
ttgatcgaagagctcgggcgtctctatggctacaaccgcttgccggttcgttatccgcaa
gcgcgtctggcgccccaggccaaggcggaagctcgttctgagttgccggcactacgccgt
ttgctggtggcgcgtggctatcaagaggctatcacctatagcttcatcgatccgaagctg
ttcgagctgttcaatccgggcgttgagccactgcaattggccaacccgatttctgccgat
atgtctgccatgcgctcctcgctgtggccgggtttggtcaaagcgctgcagcacaacctg
aatcgccaacagtcgcgtgtgcgtctgtttgaaagcggactgcgctttgtcggtcagttg
ccgggactcaagcaggaggcgatgctggctggcgtaatcaccggtagccgtttgcctgag
gcatgggccaatggacgtgaaggtgtggacttctacgatctgaaagcggatgtcgaggcg
ttgttaagccatgctggagccgtcgaatctttccgcttcgtgccgggcgaacatcccgcg
ctgcatccagggcagacggcacaggtcgagcgcgatgggcgtctggttggctttatcggg
gcgatccatccggagctggctcggtcgcttggcctcgagcagccgctctatctcttcgaa
ttggtattgtccgaagttgctcagggacgcttgccgaagttcagcgaactgtcgcgtttc
cctgaagttcgccgtgatttggcactgttggtggggcgtgatgtcgctgccgaggcggtg
ctggcgactatccgtgaggcggccggtgagtggctaacggacctcaggctgtttgacgtg
tatcacggtaaaggcattgatccacatagaaaaagcctggccgtcggcttgacctggcaa
catccatcgcgcactcttaatgacgatgaggtgagtagtacaacgcaaaacatccttacc
tcgctggaacaaaggttcaatgccacgttaaggaagtaa
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