Pseudomonas cavernae: D3880_11920
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Entry
D3880_11920 CDS
T08208
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_11920
Transporters [BR:
pcav02000
]
Other transporters
Pores ion channels [TC:
1
]
D3880_11920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AYC33027
UniProt:
A0A385Z4L3
LinkDB
All DBs
Position
complement(2606943..2609066)
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AA seq
707 aa
AA seq
DB search
MKHPTLFRPSMFLYGLSVAAVCLGQGDAVQARESAVLLDALVVSGTYRPDDSFDLPFSVD
SLDQQQISDGQLGINASEVLNRVPGLVVQNRQNYAQDLQISSRGFGARAAFGVRGLKLIA
DGIPASTPDGQGQAATFNLDTAERIEVLRGPVATLYGSNAGGVIQLFSRDGEGAPRIGAE
TLIGSDGLSKNHLSAEGAVAGAGFVLDASRLDTDGYRDHSAARRDQTFAKLNLDPDADSK
LALIYSSLEQNGTQDPLGQTWEAYKADPRSVTANAQLYNTRKSIDHQQLGMNYERYMGEA
TLQLNAYTGERSVIQYLSIPKGTPASERGGGVVDFDRTFYGAGVRWLQPVSSAPGELTLI
AGLDFDRSEDDRRGFQNFIGSQTGIKGELRRDEVDTATSLDPYGQANWAIDNWTIQAGLR
HSTMQLEVADHFLSNGDASGDKRYQQNNPALSVMYAFAPNLHGYVSVGKGFETPTQAELA
YAPGGREGFNFGLKPATSKQYEVGLKVLLGDRTRINAALFQISTEDELVVAQSVGGRTSY
QNAGRTLRRGFELALASQISEQWSTHIAYTHLQATYDSDFISGSGASQKRVDEGNYLPGI
PQNTLFAELNWQPRDWLSTAIEGLYRSKVYVEDSNNARPAPAYSVFNWRARFEQKHAPWT
FQQTLRLDNLLDRQYVGSVIVGDGNGRFYEAAPGLSWYAGANLSYQF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccgacgctattcagaccatcgatgtttttgtacgggttgtcggttgccgcg
gtttgcttggggcagggggacgcggtacaggctcgggagagcgcagtgctgctcgatgct
ctggtcgtcagcggcacctacaggccggatgacagcttcgacctgccattctcggtggat
agcctcgatcagcagcaaatcagtgacggccagctcggtatcaatgcttccgaagtcctc
aatcgggtgccgggactggtggtgcagaaccgccagaactacgcccaggatctgcaaata
tcctcgcgcggcttcggtgcgcgcgcggccttcggcgtgcgcggcctcaagctgattgct
gacggcattccagccagtaccccggacggccaaggccaggcggcgactttcaatctcgat
accgccgagcgcatcgaagtgctgcgtggcccggtcgctactctgtatggcagcaatgcc
ggtggcgtgatccagctgttctcccgagatggtgagggcgctccgcgcattggcgctgag
actctgatcggcagcgacggtctgagcaagaaccacctcagcgccgaaggcgcagtggcc
ggcgccgggtttgtgctcgacgcctcgcgcctggacaccgacggctaccgcgaccacagc
gccgcgcgacgcgaccagacctttgccaagctcaaccttgaccccgacgccgacagcaaa
ctggcgctgatctacagcagccttgagcagaacggcacgcaggacccgctggggcaaacc
tgggaagcctataaagccgacccgcgttcggtcacggccaacgcgcagctctacaacacc
cgcaaaagcatcgaccaccagcagttggggatgaactacgagcgctacatgggtgaggcg
accttgcagctcaatgcctacaccggcgagcgcagcgtgattcagtacttgtcgattccc
aaaggcactccggcgagtgagcggggcggcggcgtggtcgactttgaccggacgttctac
ggcgccggggtgcgctggttgcaaccggtcagcagcgcgccgggcgagctgaccctgatc
gccgggctggacttcgaccggagcgaagacgaccgtcgcggcttccagaatttcattggc
agccaaacaggcatcaagggcgaactgcgccgcgatgaagtcgataccgccaccagcctc
gatccctatgggcaagccaactgggccatcgacaactggacgatccaggccgggctgcgc
cacagcaccatgcagttggaagtcgctgaccacttcctcagcaacggtgacgccagtggt
gacaaacgctaccagcagaacaacccggcgctcagcgtgatgtacgccttcgccccgaac
ttgcatggctatgtcagcgtcggcaaaggcttcgaaaccccgacccaggccgaattggcc
tatgcccccggcggccgtgaaggcttcaacttcggcttgaagcctgccaccagcaagcaa
tacgaagtgggtctgaaggttctgctcggtgaccgcacgcggatcaatgccgcgctgttc
cagatcagcaccgaagatgagctggtggtcgcgcaatcggtgggtgggcgcaccagctat
caaaacgccggacgcaccctgcgccgcggcttcgagctggcactggcaagccagatcagc
gagcagtggagcacccacatcgcttatacccatctgcaagcaacctacgacagcgacttt
atcagcggcagcggtgccagccagaagcgcgtcgacgagggcaactacctgcccggcatc
ccgcagaacaccctgttcgccgaactcaactggcagccccgcgactggctcagtaccgct
atcgagggcctgtaccgcagcaaggtctatgtcgaagacagcaacaatgcgcgccccgcc
ccggcctacagcgtgttcaactggcgcgcccgcttcgagcagaaacacgcgccctggacc
ttccagcagaccttgcgcctggacaacctgctggatcgccagtacgtcggttcggtgatc
gtcggtgatggcaacggccgcttctacgaagcggcgccggggctgtcatggtacgcaggc
gccaatttgtcctatcaattctga
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