Pseudomonas cavernae: D3880_12215
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Entry
D3880_12215 CDS
T08208
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_12215
Transporters [BR:
pcav02000
]
Other transporters
Pores ion channels [TC:
1
]
D3880_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
LRR_10
Autotransporter
Porin_2
Motif
Other DBs
NCBI-ProteinID:
AYC35084
UniProt:
A0A385Z8D3
LinkDB
All DBs
Position
complement(2683046..2685184)
Genome browser
AA seq
712 aa
AA seq
DB search
MLGVLVIPAVQAETNKEALAIPATAVTSAYEEQSYMPTESKSALKIDAPLRDIPQTVNVV
PQSVIKDQGAQSLEDVLKNVPGVGLSNGDGQRDQVTIRGFSAIGDIFVDGMRDDALYFRD
LSNIERVEVIKGPAAVLYGRGSSGGLINNVSKKPTFAPRQEVGVSFDSEGQRRTQFDAGW
ADDQQRDKAFRVTGAFEDSDTFRDDGYIDRKALAPSAYFRLSDDLELNLGATYLYDKRLI
DFGIPGQLAAYQPAAARLPASAVGNRPVDVDRETRFGSGDPDQDYARSEVFTFTAGVDYR
ISDDLTLTNATRYYHYDLDRNNTLADSSATRFVTAPNGELLVKLNRGNVARDEYGVFNQT
ELKQQAQLAGMAHNLLYGVELGHQDKHQRSVNQNNVAQVPVFRDGLVPVPEHAVGPRTVG
TNLQDTAGFYVQDLVELAPQWKALLGVRYDIFGQEYDDERVQNVDLDRTDKTWSPRAGLV
YQPDQVQSYYVSVSRGYQPSGEVFALAPSNQHLEPEETTNYELGAKWDFLDSRLSVTAAV
FRLERTNMKTADPANPNLTVLAGEQRTDGFEATVSGQLSDKWQVYGGYAYLDAEITKSNS
KTNGVPNEGQTPTLTPRNSANLWLVRSLAPRWRLGMGANYVDERFTALDNNVVMPGYTTF
DAALLYNEPTWDAALRLTNLTDKEYYASAHGSVDLITPGAPRTLEVSANYRF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtgttttggtcataccagcggtgcaggcggaaactaacaaggaagctttggct
ataccggcaactgcggttaccagcgcatatgaagaacaaagctacatgcccaccgaaagc
aagagcgcgctgaagatcgacgcgccgctgcgcgacatcccgcagacggtcaacgtggtg
ccgcagagcgtgatcaaggaccagggcgcacagtcgctggaagacgtgctgaagaacgtg
cccggcgtcggcctgtccaacggcgacggccagcgcgaccaggtcaccatccgcggcttc
agcgccatcggcgacatcttcgtcgacggcatgcgcgacgacgccctgtacttccgcgac
ctgtccaacatcgagcgggtcgaggtgatcaagggcccggccgccgtgctctacggccgc
ggctcgtccggcggactgatcaacaacgtcagcaagaagcccaccttcgccccgcgccaa
gaggtcggcgtcagcttcgacagcgaaggccagcgccgcacccagttcgatgccggctgg
gctgacgaccagcagcgcgacaaggcgttccgcgtcaccggcgccttcgaggacagcgac
accttccgcgacgacggctacatcgaccgcaaggccctggcgccctcggcctacttccgc
ctgtccgacgacctcgagctgaacctcggcgccacttacctgtacgacaagcggctgatc
gacttcggcatccccggccagctcgccgcctaccagccggcagcggcccgcctgcccgca
tcggcggtcggcaaccgcccggtggacgtcgaccgcgagacgcgcttcggctccggcgac
ccggaccaggactacgcgcgcagcgaggtgttcaccttcaccgccggcgtcgactaccgg
atcagtgacgatctgaccctgaccaacgccacccgctactaccactacgatctggaccgc
aacaacaccctggccgactccagcgcgacccgcttcgtcaccgcgccgaacggtgagctg
ctggtcaagctcaaccgcggcaacgtggcccgcgacgaatatggcgtgtttaaccagacc
gagctcaagcagcaggcgcagctcgccggcatggcgcacaacctgctctacggcgtggag
ctgggccaccaggacaagcaccagcggtccgtcaaccagaacaacgtggcccaagtgccg
gtgttccgcgacggcctggtgccggtgccggagcacgccgtcggaccacgcaccgtaggc
accaacctgcaggacaccgccggcttctacgtacaggacctggtcgagctggccccgcag
tggaaggccctgctcggcgtgcgctacgacatcttcggccaggagtacgacgacgagcgc
gtgcagaatgtcgacctcgaccgcaccgacaagacctggagcccgcgcgccggcctggtc
taccagccggaccaggtgcagtcctactacgtgtcggtgagccgcggctaccagccgtcc
ggcgaagtgttcgccctggcgccgagcaaccagcacctggagccggaagagaccaccaac
tacgagctgggcgccaagtgggacttcctggacagccgcctgtcggtgaccgccgcggtg
ttccgcctggagcgcaccaacatgaagaccgctgacccggccaaccccaacctcacggtg
ctcgccggcgagcagcgcaccgacggcttcgaggccacggttagcggccagctcagcgac
aagtggcaggtctacggcggctacgcctacctagacgccgagatcaccaagtccaacagc
aagaccaacggcgtgcccaacgaaggccagacaccgaccctcaccccgcgcaacagcgcc
aacctctggctggttcgcagcctggccccgcgctggcggctgggcatgggcgccaactac
gtcgacgagcgcttcaccgcgctggacaacaacgtggtgatgcccggctataccaccttc
gacgccgccctgctgtacaacgaaccgacctgggacgccgccctgcggctgaccaacctg
accgacaaggagtactacgcctccgcccacggctcggtcgacctgatcaccccgggtgca
ccacggaccctggaagtgagtgccaactaccggttctga
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