Pseudomonas cavernae: D3880_12345
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Entry
D3880_12345 CDS
T08208
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcav03110
]
D3880_12345 (clpA)
Chaperones and folding catalysts [BR:
pcav03110
]
Heat shock proteins
HSP100
D3880_12345 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_lid_9
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
RuvB_N
TniB
AAA_18
AAA_14
AAA_7
TsaE
Mg_chelatase
AAA_3
nSTAND3
AAA_6
Zeta_toxin
IstB_IS21
bpMoxR
RNA_helicase
ATPase_2
NACHT
TIP49
AAA_33
AAA_28
Torsin
IPT
AAA_17
NB-ARC
DUF815
CobT_C
Motif
Other DBs
NCBI-ProteinID:
AYC33102
UniProt:
A0A385Z6H3
LinkDB
All DBs
Position
complement(2704880..2707150)
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AA seq
756 aa
AA seq
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MLNRELEVTLNLAFKEARAKRHEFMTVEHLLLALLDNEAAANVLRACGANLDRLRHDLQE
FIDSTTPLIPQHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA
VFLLKQQSIARIDVVNFIAHGISKVPGHGDHSLNDQEMQDEEGGESSPSGNPLDAYASNL
NDLARQGRIDPLVGREHEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDSQV
PDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPHAILFIDEIHTIIGAGAA
SGGVMDASNLLKPMLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVTEPSVEDTIG
ILRGLKVRFEQHHGIEYSDEALRAAAELAARYINDRHMPDKAIDVIDEAGAYQRLQPLEK
RAARIDVAQVEDIVAKIARIPPRNVTSSDKQLLRNLERDLKLTVFGQDAAIDSLSTAIKL
SRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKAMGIELVRFDMSEYMERHTVSRLIGA
PPGYVGFDQGGLLTEAITKMPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADF
RNVILIMTTNAGAEIAARASIGFTHQDHSTDAMEVIKKSFTPEFRNRLDTIIQFGRLSHE
VIKSIVDKFLTELQAQLEDKHVTLEVSDTARGWLAEAGYDVQMGARPMARLIQDKIKRPL
AEEILFGELAEHGGVVHIDLKDGELSFEFETTAELV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtgagctcgaagtcaccctcaatctggctttcaaagaggctcgcgcaaag
cgtcatgagttcatgacggttgagcaccttttgttagcgcttttggataatgaggcggca
gccaatgtgctgcgcgcttgtggcgccaacttagacaggctgcggcatgacctgcaggag
ttcatcgactccacaacgccgctgattccccagcatgacgaagatcgtgaaacccagccg
acgcttgggtttcagcgggttctccagcgcgccgtatttcacgtgcagagctccggcaag
cgggaagtgacgggcgccaatgtgttggtggcaatcttcagcgagcaggaaagtcaggca
gtgttcttgctcaagcagcagagcattgcgcgcattgacgtggtcaacttcattgcgcat
ggcatttccaaggttcctgggcatggcgatcattccctgaatgaccaggagatgcaggac
gaagagggaggcgagtcttcgccctccggcaatccgctcgatgcctatgccagcaacctt
aacgacctcgcgcgccaggggcggatcgatccgctggtggggcgtgagcatgaggtcgag
cgcgttgcgcaaatcctggcgcggcggcgtaaaaataatccgctgttagtgggcgaggcg
ggggttggtaaaaccgccatcgcagaaggtctggccaagcgcattgtcgatagccaggtt
ccggacttgctggccgacagcgtggtttactccctggatcttggcgccttgctggcaggt
actaaataccgcggggacttcgagaaacgtttcaaggcgctgctcaatgagctgcgtaag
cggcctcacgccattctgttcatcgacgagattcacaccatcatcggcgcaggcgctgct
tctggcggggtgatggatgcttccaacctgctcaagccgatgctgtcttcgggtgagatc
cgctgcatcggctccaccacgttccaggagttccgtggcattttcgagaaagatcgtgcg
ctcgcgcgacgttttcagaaggtggatgtcaccgagccttcggtcgaggacaccatcggc
atcctgcgtggactgaaggtgcgtttcgagcagcatcatggtatcgaatacagcgatgag
gcgctgcgcgccgccgccgaactggccgctcgttacatcaatgatcggcacatgccggac
aaggccatcgatgtgatcgacgaggccggcgcttaccagcgcttgcagccgctggagaag
cgggctgcgcgcatcgacgtcgcccaggtggaagatatcgtggcgaaaatcgcccgaatt
ccgccgaggaatgtcaccagctcagacaagcaattgctgcgcaacctggagcgtgacctc
aagctcacggtgtttggccaagatgcggcgatcgactcgctatccacggcgatcaagctg
tcgcgggccgggctcaaatcgccggataaaccagtcggctccttcctctttgctgggcca
accggggtgggcaagacggaagccgctcggcagcttgccaaggctatggggatcgagctg
gtgcgtttcgacatgtccgagtacatggagcggcataccgtttcgcgcctgatcggcgcg
cctcccggctatgttgggtttgaccagggtgggctgttgaccgaggcgatcaccaagatg
ccgcattgcgtgttgctgctcgacgagatcgagaaggcgcatccggaagtcttcaacctg
ctgctgcaggtaatggaccacggtaccctgaccgataacaacgggcgcaaggcggacttc
cgtaatgtcatcctgattatgactaccaatgctggggcggaaatcgcggcgcgggcttcg
atcggctttacccatcaggatcactcgactgatgcgatggaagtcatcaagaagagcttc
actccggagtttcgtaaccgcctggacaccatcattcagttcggtcgtctgagccatgag
gtgatcaagagtatcgtcgacaagttcctcaccgaattgcaggcgcaactcgaggacaag
catgtcactctcgaggtcagcgatacggcgcggggctggctggccgaggctggttatgac
gtgcagatgggcgcgcggccaatggcgcgcttgattcaggacaagatcaagcggccgctg
gcggaagaaattctctttggtgagttggccgagcatgggggggtggtgcatatcgacctg
aaggacggcgagctgtcctttgagtttgaaaccacggcagagctggtctag
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