Pseudomonas cavernae: D3880_12625
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Entry
D3880_12625 CDS
T08208
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcav03000
]
D3880_12625
Transcription factors [BR:
pcav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
D3880_12625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
TetR_C_16
Motif
Other DBs
NCBI-ProteinID:
AYC33143
UniProt:
A0A385Z5C5
LinkDB
All DBs
Position
2763834..2764403
Genome browser
AA seq
189 aa
AA seq
DB search
MRYPDTHKAETNQRIISEAAERFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVQQ
ALRAAADKLDEACAETFAQDKPLQQFIDNYLSGAHRANPGAGCPLPTMAAELGQRGQPSP
ITDEVVRNRLGMIEGALPGPQADEQSVVILSALVGALLLSRSVEDSQLSDQVLHSTQNWL
KQAFCCAQA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgagatatccggatacccataaagcggaaaccaaccagcgcatcatcagcgaagcggcc
gaacgctttcgccgcgatggtatcggcgccaccggcctgcagccgctgatgaaagccttg
ggcctgacccacggcggcttctacgcgcatttcaaatccaaggatgacctggtccagcag
gcgttgcgcgccgctgcagacaagctcgatgaagcctgcgcggagactttcgctcaggac
aagccgctgcagcagttcatcgacaattacttgtccggcgcccaccgtgccaatcccggc
gccggctgcccattgccaaccatggcggcggagctgggccagcgcggccagcccagcccg
atcaccgatgaagtggtgcgcaaccgcctcggaatgatcgaaggtgccctgcccgggccg
caggctgacgagcagagcgtggtgatcctctccgcactggtcggtgcgctactgctgtcg
cgcagcgtcgaagactcacagctgtccgaccaggtcctgcacagcacgcagaactggctg
aagcaggcgttctgctgcgcgcaggcctaa
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