KEGG   Pseudomonas cavernae: D3880_13875
Entry
D3880_13875       CDS       T08208                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pcav  Pseudomonas cavernae
Pathway
pcav00061  Fatty acid biosynthesis
pcav00071  Fatty acid degradation
pcav01100  Metabolic pathways
pcav01212  Fatty acid metabolism
pcav02024  Quorum sensing
pcav04146  Peroxisome
Module
pcav_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    D3880_13875
   00071 Fatty acid degradation
    D3880_13875
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    D3880_13875
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D3880_13875
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pcav01004]
    D3880_13875
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcav04147]
    D3880_13875
Enzymes [BR:pcav01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     D3880_13875
Lipid biosynthesis proteins [BR:pcav01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   D3880_13875
Exosome [BR:pcav04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   D3880_13875
  Exosomal proteins of breast cancer cells
   D3880_13875
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: AYC33375
UniProt: A0A385Z293
LinkDB
Position
complement(3048714..3050381)
AA seq 555 aa
MANAVRLPLEVFYEREARHPHTRYMVQPLGGGRLEELSWSDVGEQARRAANWLRARELPA
GSRIAIISKNCAHWIIADLAIWMAGHVSVPLYPNLSADSARQVLEHSESAIAFVGKLDDW
PAMAPGVPAGVPTVALPLHPQGQFDFQWSDLQACTPIRDNPTGNAEQLATIIYTSGTTGT
PKGVMHNFGNFGFAGSNGLEMFQTQENDRLISYLPLCHVAERMFVELGSLYGGQAVFFAE
SLDTFLEDLKRARPTMMFGVPRIWTKFQMGVYAKMPAARLDFLLKLPLLGRLVGRKVLAG
LGLDAVRMALCGAAPVPEALLRWYQRMGLDVLEVYGMTENCGYSHLCRPGKNKTGWIGQP
SLGVEVRISEEGEVLVHSGATMQGYYKDPEKTAETLTADGYLHTGDKGEQDAEGYLRLTG
RIKEIFKTSKGKYVAPAPIENRLAVYPHIEQVCVVGDGLPQPMALCVLSQAGRQEAAGSS
RGELENSLRSLLDEVNKALDKHERLLTLVLVKETWAVENGFLTPTLKIKRAVVESAYGAH
FQHWLDRRETVLWHE
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtggctaatgccgttcgtttgcccctggaagtgttctacgagcgtgaggctcgacacccg
catacgcgttacatggttcaaccgctgggcggtggccggctcgaggagctgagctggtcc
gacgtcggtgagcaggcacgccgtgcggccaactggctgcgcgcccgcgaactgccggcc
ggcagtcgcatcgccatcatttccaagaactgcgcgcactggatcatcgccgatctggcg
atctggatggccgggcatgtgtcggtgccgctgtatcccaacctcagcgccgattccgcc
cgccaggtgctcgagcattccgagtcggcaatagcctttgttggcaagctggacgactgg
ccggcgatggcccccggtgtgccggctggcgtgccgaccgtagcgctgccactgcatccg
caaggccaattcgattttcagtggagcgacctgcaagcctgcacgccgatccgcgacaac
ccgaccggtaatgccgagcaactcgccaccatcatctacacctcgggcaccaccggcacg
ccgaaaggggtgatgcacaacttcggcaatttcggcttcgccggcagcaacggtctggag
atgttccagacccaagagaacgatcgcctgatttcctacctgccgctgtgtcatgtggcc
gagcgcatgttcgtcgaactgggctcgctgtatggcgggcaggcggtgttcttcgccgag
agcctggacaccttcctcgaagatctgaagcgtgcgcggccgaccatgatgttcggtgtg
cctcgcatctggaccaagttccagatgggcgtgtacgcgaaaatgccggcggccaggctc
gactttctgctcaagctgccgctgctcggccgcctggtcggccgcaaggtgctcgccggc
ctcggcctggatgccgtgcgcatggccctgtgtggcgccgcgccggtgccggaggcgctg
ctgcgctggtaccagcgcatgggcctggatgtgctcgaggtctacggcatgaccgagaac
tgcggctattcccatctgtgccgcccaggcaagaacaaaaccggctggatcggccaaccc
agcctgggggtcgaggtgcgcatcagcgaggaaggcgaggtgctggtgcatagcggtgcg
accatgcagggctactacaaggacccggaaaaaaccgccgaaaccctcaccgcggatggt
tacctgcacactggcgacaagggcgagcaggacgccgagggctatctgcgcctgaccggg
cggatcaaggagatcttcaagaccagcaagggcaagtacgtggccccggcaccgatcgag
aatcgtctggcggtgtatccgcacatcgagcaggtctgcgtggttggtgatggcctgccg
cagcctatggcgctctgcgtgttgtcccaggcgggccggcaggaggcggccggcagttcg
cgaggcgagctggagaacagcctcagatcgctgctcgacgaggtcaacaaggcgctcgac
aagcacgagcgtctgctcaccttggtgctggtcaaggagacctgggcggtggaaaacggc
ttcctcaccccgaccctgaagatcaaacgtgcggtggtcgagagcgcctatggcgcgcat
ttccaacactggctggaccgtcgcgagacggtgctctggcacgaataa

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