Pseudomonas cavernae: D3880_13915
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Entry
D3880_13915 CDS
T08208
Name
(GenBank) PAS domain S-box protein
Organism
pcav
Pseudomonas cavernae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
PAS_8
HATPase_c
Response_reg
GAF
HisKA
PAS_3
Diguanyl_cycl_sensor
HATPase_c_2
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
AYC33382
UniProt:
A0A385Z795
LinkDB
All DBs
Position
complement(3057626..3060451)
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AA seq
941 aa
AA seq
DB search
MPKAIAASSVEHQLRQIVDNSSAVIYVKDLDGRLRLVNQAFETLFGMRAAQVLGHTDHEL
FPPAVADTLRANDRRVAELGQALEFEEQVELDGEIRTYLSTKFPLFDSAGRVIAVCGMST
DISSRKRQEEALRHIALGISAASGAEVFAEIVRYLAHALNADIAAVARLRDTNMHQLETV
GLYFNGQPHDNVIYELEGTPCEWVVSKGFHFVGQDAQKRFPEDGFLRKFGLQSYAGYPLF
ATDGHVIGLISVSSRGTLASPELTEALLKVFSVRAAAEIQSCDAEASYRAIFDSSEDAIF
VHDLDSGVLVDANPKACQAYGYSYAEMLGLTIDDFSAGYRPYTGEDAAGWLARARDGELQ
RFEWHRRNRDGSLHWDEVMLKRATIGGVERILAITREITQRKQAEQALRASEQQYRAIFS
TALDCIISVDGEGRVLAFNPAAERCFGYAREQAVGRLLAELIVPERYLAVYQRGLQRYLE
SRDGPLFGRRVEIEVRRADGQEFPAELAMTVVEGAQGPLFIGYLRDITELKEAEAQRAEL
AQQLRQAQRMEAIGHLAGGIAHDFNNLLTGMLGYTVMAEELAEQLPDARLSRYLVHVQRS
AERARDLIQQMLTFSRGSRGQPRTVNLAERIDDFIKLVEASLPSSVEIETRLAADLPPVL
VDPVQLEQVLMNLCINARDAMSGVGRLRVGLSLQTLQRSVCASCRQPFSGLHLALSVSDS
GPGIAPQVCEHMFEPFFSTKASGQGSGMGLSMVHGIVHEYAGHILVDSRAGEGSTFQIFL
PALAQDTPCPANPIEPNPTVQQGQLQGRVAVVDDEPMVAEFMADRLSDWGVQVRCFSDAE
QACAVLCADPYAWDLVILDQSMPRLTGLQLARRLLALRADLPIVLYSGFSDQLSESQVQA
EGLKALLRKPLDQAQLHLLLRQYLPMAAADTEAKQSARRQT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggccattgctgccagctcggtcgagcaccagctgcggcagatcgtcgataac
agcagcgcggtgatctatgtaaaggatctcgacggtcgcctgcggctggtcaaccaggcc
ttcgagacgctgtttggcatgcgcgccgcccaggtgctcgggcataccgatcacgagctg
ttcccgccggcggtggccgatacgctgcgggccaatgatcggcgcgtcgccgagctcggc
caagcgctggaattcgaggaacaggtggagctggatggcgagatccgcacctatctgtcg
accaagttcccgttgttcgacagcgccggtcgggtcatcgcagtatgcggcatgtccacc
gacatcagctcgcgcaagcgccaggaggaggcactgcggcatatcgctttgggcatttcc
gccgccagtggggcggaggtgttcgccgagatcgtccgctatttggcccacgcactgaat
gccgatatcgccgcggtcgcccgtctgcgcgacaccaatatgcaccagctcgagaccgtc
ggcctgtatttcaacggccagccgcacgataacgtcatctacgaattggaaggcaccccc
tgtgagtgggtggtcagcaagggcttccattttgtcggccaggacgcgcagaagcgtttc
ccggaggatggcttcctgcgtaagttcggcttgcagagctatgccggttatccactgttt
gccaccgacggccatgtgatcggtctgatctcggtctccagtcgcggcacgctggcttcg
ccagaactgaccgaagctctgctgaaagtgttttccgtgcgtgcggcggcggaaatccag
agctgcgacgcggaagccagctatcgggcgatcttcgacagttccgaggatgccatcttc
gtccacgatctggacagtggcgtgctggtggacgccaaccccaaagcttgccaggcctat
ggctacagctacgcggagatgctcgggctgaccatcgacgatttcagcgccggctatcgt
ccctacaccggcgaggatgccgccggctggttggcgcgtgcgcgggatggcgagttgcag
cgtttcgaatggcaccggcgcaaccgcgacggcagcctgcattgggatgaggtgatgctc
aagcgcgcgaccatcggcggggtcgagcggattctcgccatcacccgcgagatcacccag
cgcaagcaggcggagcaggcgctgcgggccagcgagcagcaataccgggcgatcttcagt
acggcgctggactgcatcatcagcgtcgatggcgagggccgggtgctggcgttcaacccg
gcggccgagcgctgtttcggctacgcgcgcgagcaggcagtcgggcgcctgctggccgaa
ctgatcgttcccgagcgttatctggccgtctaccagcgtggcttgcagcgctatctggag
agccgggacgggccgctgttcggccggcgcgtggagatcgaggtgcgccgggccgatggc
caggagtttcccgccgagctggcgatgacggtggtggagggcgcgcaggggccgctcttc
atcggctatctgcgcgacattaccgaactcaaggaggccgaggcgcagcgtgcggagctg
gcccagcagctgcgtcaggcgcagcggatggaggcgatcggtcatctcgccggcggcatc
gcccacgacttcaacaacctgctcaccggcatgctcggttatacggtgatggccgaggag
ctggccgaacagttgccggatgcacgcctgagccgctacctggttcacgtgcagcgctcc
gccgagagagcccgcgacctgatccagcagatgctcaccttcagtcgcggcagtcgcggc
cagccgcggaccgtgaatctggccgagcggatcgacgacttcatcaagctggtggaggcc
agtctgccctccagtgtggagatcgaaacccggctggcggccgacctgccaccggtgctg
gtcgacccggttcagttggagcaggtgctgatgaacctgtgcatcaatgcccgcgatgcc
atgtccggggtcggtcgcctgcgggtggggctgagtctgcaaacgctgcagcggagtgtc
tgcgcctcgtgtcggcagccattttccgggctgcacctggcgctcagcgtgagcgacagc
ggccccggcatcgcgccgcaggtgtgcgaacacatgttcgagccgttcttctcgaccaag
gccagcggccagggcagcggcatgggcctgtcgatggtgcatggcatcgtccacgagtat
gccggacacattctggtcgactcgcgggcaggcgagggcagcaccttccagatcttcctg
ccggcgctggcgcaggacacgccctgtccggccaatcccatcgagccgaatccaacggtg
cagcaggggcagttgcagggacgggtggcggtggtcgacgacgagccgatggtggccgag
ttcatggccgatcgcctgagcgactggggtgtgcaggtgcggtgtttcagcgatgccgag
caggcctgcgcggtgctctgcgccgatccgtacgcctgggacctggtgattctcgatcag
agcatgccgcggctgaccggcctgcagttggcgcggcgcctgctggcgttgcgggcggac
ctgccgatcgtgctctacagcggcttcagcgatcagctcagcgagagccaggtccaggcg
gaagggctcaaggcactgctgcgcaagccgctggatcaggcgcagttgcaccttctgctg
cgccagtacctgccaatggcggcagctgataccgaagcgaaacaatctgcgcgccgccag
acataa
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