Pseudomonas cavernae: D3880_14275
Help
Entry
D3880_14275 CDS
T08208
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
D3880_14275
Enzymes [BR:
pcav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D3880_14275
Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D3880_14275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
AYC33452
UniProt:
A0A385Z7F6
LinkDB
All DBs
Position
3134018..3135946
Genome browser
AA seq
642 aa
AA seq
DB search
MRGRLLSLLSCFIFSTVTFSAAEAASLAQQRQYYDTAKRALAKGDAGPYRMYASALRDYP
LEPYLAYDELTARLKSASNTEIEKFLTEHGDLPQANWMKLRWLRWLAERGEWQTFVNYYD
PKMNFTELDCLYGQYQLSHGLKAEGNTTAEKLWLVGKSQPEACDVLFSMWSSRGQLTEEK
RWKRAKLAAEARNYGLASHLVKTLPTLSSQGQLMLDVAQKPLMLNQTARFTPTSQTMADV
VGLGLRRLAREYPDKAIDLLDSYSKRLPFSTEEKVAIAREIGLSLAKRFDSRALAVMTKY
DPGLRDNTVSEWRMRLLLRLGRWDAAYQLSRQLPADLAKTNRWRYWQARSLQLAQPNSKE
PLALYQPVARERDFYGFMAADQIKSPYQLNNKPLALDPKVIQKVRNTAGIRRALEFHARG
QIVDGRREWYHVSRLFSRDELVAQARLAYDMQWYFPAIRTISQAQYWDDLDVRFPMAYRP
TLVREARNRGLHSSWVFAVTRQESAFMADARSGVGATGLMQLMPATAKETARKFGIPLGS
PQQVLIPEKNIQLGAAYLSQIHGQFNGNRVLASAAYNAGPGRVRQWLRGTNHLAYDVWVE
SIPFDETRQYVQNVLSYSVIYGHKLNAPQPLVEWHERFFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgtctgctcagcctgttgtcctgcttcattttctcaaccgtaaccttcagt
gccgccgaggccgccagcctggcccagcagcgccagtattacgacacggccaaacgcgcc
ctggccaagggcgatgccggtccttaccggatgtatgccagtgccctgcgcgactatccg
ctggaaccctatctggcctatgacgagctgaccgcccgtctgaaaagcgcgagcaacacc
gaaatcgagaaatttctcaccgagcacggcgacctgccgcaggccaactggatgaagctg
cgctggctgcgctggctggccgaacgtggcgagtggcagacgttcgtcaactattacgac
ccgaagatgaacttcaccgagctggactgtctctacggccagtaccagctcagccacggc
ctgaaggccgaaggcaacaccaccgccgagaagctctggctggtgggcaagtcgcagccg
gaagcctgtgatgtgctgttcagcatgtggagcagtcgcggccaactgaccgaggagaag
cgctggaagcgcgccaagctggccgccgaggcgcgcaactatggcctggccagtcacctg
gtgaaaaccctgccgacgctctccagccagggccaattaatgctcgatgtggcgcagaag
ccgctgatgctcaaccagaccgcgcgcttcacccccaccagccagaccatggccgatgtg
gtcggtctcggtttgcgccgcctggcccgcgaatacccggacaaggccatcgacctgctc
gacagctacagcaagcgcctgcccttctccaccgaggagaaggtcgccatcgcccgcgag
atcggcctgagcctggccaagcgcttcgattcccgtgccctggcggtgatgaccaagtac
gaccccggcttgcgcgacaacaccgtgtcggaatggcgcatgcgcctgctgctgcgcctc
gggcgctgggacgctgcctatcagctcagccgccaactgcccgccgacttggcgaaaacc
aaccgctggcgctactggcaggcccgcagcctgcaactcgcgcaaccgaacagcaaggag
ccgctcgccctctaccagccggtggcgcgcgagcgggacttctacggcttcatggccgcc
gaccagatcaaatcgccttatcagctgaacaacaagccgctggcgctcgacccgaaagtc
atccagaaggtgcgtaacaccgccggcatccgccgcgccctggagttccatgcgcgcggc
cagatcgtcgacgggcgccgcgagtggtatcacgtcagtcgcctgttcagccgcgatgaa
ctggtcgcccaggcgcgcctggcctacgacatgcagtggtatttcccggccatccgcacc
atcagccaggcacagtactgggacgatctagatgtgcgtttcccgatggcctaccggccg
accctggtccgcgaggcccgcaaccgtggcctgcattccagctgggtgttcgccgtcacc
cgccaggaaagcgcgttcatggccgacgcccgctccggcgtcggcgctaccggcctgatg
cagttgatgccagcgaccgccaaggaaaccgcgcgcaagttcggcattccgctgggctcg
ccgcaacaggtgctgatcccggagaagaacatccagctcggtgccgcctatctgagccag
atccatggccagttcaacggcaaccgtgtgctcgcctccgctgcttacaacgccggcccc
gggcgcgtgcgccagtggctcaggggcaccaaccacttggcctacgacgtctgggtggaa
agcatcccgttcgacgaaacccggcagtacgtgcagaacgtgctgtcttattcggtgatc
tatggccacaagctcaacgccccgcagccgctggtcgagtggcacgaacgtttcttcgac
gatcagtga
DBGET
integrated database retrieval system