Pseudomonas cavernae: D3880_14420
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Entry
D3880_14420 CDS
T08208
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00550
Peptidoglycan biosynthesis
pcav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3880_14420 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcav01002
]
D3880_14420 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
D3880_14420 (dacB)
Enzymes [BR:
pcav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D3880_14420 (dacB)
Peptidases and inhibitors [BR:
pcav01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
D3880_14420 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
D3880_14420 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AYC33479
UniProt:
A0A385Z2I7
LinkDB
All DBs
Position
3163017..3164474
Genome browser
AA seq
485 aa
AA seq
DB search
MIKILRHLAIASLLLPIALPASATNSSLPPQVQQLLKKSKISNNSLSLVTLPLTGPGTAT
AVNADVSVNPASTMKLITTFAALELLGPTYQWKTEFYTDGQLKNGVLNGNLYLKGGGDPK
LNMEKLWLMMRDLRANGVQQVSGDLVLDRSHFIQPQLPTFNDDGGDKNKPFLVGPDSLLV
NLKAVRMITRTEGGKVSVAMDPPLTNVRIDNKVKALPAAKCPGWPDVRFNPVTQYDGTTL
VVTGKLAEGCSAQSYLSLLDHPGYAAGAVRAIWQELGGSIAGKDRIDQVPKSARLLARAY
SPDLVEIIRDINKYSNNTMARQLFLSLGAQFRTSADGDDAKAAQRVIRQWLAKKGITAPH
LVMENGSGLSRAERVSARELATMLQAAWNSPYAAEYISSLPLVAMDGTMRKRLKRTALAG
EAHIKTGTLNTVRAIAGFSRDSNGNTWAVVAILNDQKPWGASSILDQVLVDLYRQPKLAG
NTAQR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatacttcgtcacctggccatcgccagtttgctcttgcctattgccctgccc
gcctccgccaccaattccagcctgccgccgcaagtgcagcagctcctgaagaagagcaag
atcagcaacaactcgctgtccctggtgaccctaccgctcaccggccctggcactgcgacc
gcggtcaatgccgatgtgtcggtgaacccggcctcgaccatgaagctgatcaccaccttc
gccgccctggaactgctcggcccgacctaccaatggaagaccgagttctacaccgacggc
cagctgaagaatggcgtgctgaatggcaacctctacctcaaaggtggcggcgaccccaag
ctgaacatggagaagctctggctaatgatgcgcgacctgcgcgccaatggcgtgcagcag
gtgagcggcgatctggtgctggatcgcagccacttcatccagccgcagctgccgaccttc
aacgatgatggcggcgacaagaacaagccgttcctggtcggcccggattcgctgctggtc
aacctcaaggccgtgcgcatgatcacccgcaccgagggcggcaaggtcagcgtggccatg
gacccgccactgaccaatgtgcgcatcgacaacaaggtcaaggccctgccggcggccaaa
tgccccggctggccggacgtacgcttcaacccggtgacccagtacgacggcaccaccctg
gtggtcaccggcaagctggccgagggctgcagcgcgcaatcctacctgtcgctgctcgat
caccccggctatgccgccggcgccgtgcgggcgatctggcaggaattgggcggaagcatc
gccggcaaggaccgcatcgaccaggtaccgaagagcgcccgcctgctggcccgtgcctat
tcgccggatctggtggagatcatccgcgacatcaacaagtacagtaacaacaccatggcc
cgccaactgttcctcagcctcggcgcgcagttccgcacctcggccgacggcgacgacgcc
aaggccgcgcagcgggtgatccgccagtggctggcgaagaagggcatcaccgcgccgcac
ctggtgatggagaacggctccggcctgtcgcgggccgagcgggtcagcgcgcgggaattg
gcgaccatgctgcaggccgcctggaatagcccctacgccgccgagtacatcagttcgctg
ccgctggtggcgatggacggcaccatgcgcaagcgcctgaagcgtaccgcgctggccggc
gaggcacatatcaagaccggtaccctcaacaccgtgcgcgccatcgccggcttcagccgc
gatagcaacggcaacacctgggcggtggtggccatcctcaacgaccagaagccctggggc
gcctcgtcgattctcgatcaggtgctggtcgacctgtatcgccagccgaagctcgccggc
aatacggcgcagcgctga
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